From c18ed40308f527fa3c3bae26f02db89356e580f5 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Sat, 16 May 2026 22:28:03 +0200 Subject: [PATCH 1/4] Add submission UUID file --- .../ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json | 44 +++++++++++++++++++ 1 file changed, 44 insertions(+) create mode 100644 mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json diff --git a/mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json b/mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json new file mode 100644 index 00000000..75eadb91 --- /dev/null +++ b/mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json @@ -0,0 +1,44 @@ +{ + "accession": "MITE9999999", + "status": "pending", + "changelog": [ + { + "version": "1", + "date": "2026-05-16", + "contributors": [ + "0000-0002-0771-9611" + ], + "reviewers": [ + "BBBBBBBBBBBBBBBBBBBBBBBB" + ], + "comment": "New entry." + } + ], + "enzyme": { + "name": "AscI", + "databaseIds": { + "uniprot": "A0A455R4Z0", + "genpept": "" + }, + "references": [ + "doi:" + ] + }, + "reactions": [ + { + "evidence": { + "evidenceCode": [], + "references": [ + "doi:" + ] + }, + "reactions": [ + { + "products": [ + "" + ] + } + ] + } + ] +} \ No newline at end of file From f2d018fa82c7b019228467c5d45ac96c78518e22 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Sat, 16 May 2026 22:38:49 +0200 Subject: [PATCH 2/4] Update submission --- .../ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json | 40 ++++++++++++------- 1 file changed, 26 insertions(+), 14 deletions(-) diff --git a/mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json b/mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json index 75eadb91..918fa771 100644 --- a/mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json +++ b/mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json @@ -16,29 +16,41 @@ ], "enzyme": { "name": "AscI", + "description": "Terpene cyclase", + "references": [ + "doi:10.1073/pnas.1819254116" + ], "databaseIds": { "uniprot": "A0A455R4Z0", - "genpept": "" - }, - "references": [ - "doi:" - ] + "genpept": "BBF25321.1", + "mibig": "BGC0001924" + } }, "reactions": [ { - "evidence": { - "evidenceCode": [], - "references": [ - "doi:" - ] - }, + "tailoring": [ + "Cyclization" + ], + "description": "Converts 16-hydroxy-ilicicolin A epoxide to ascofuranol by cyclisation to form a tetrahydrofuran ring.", + "reactionSMARTS": "[#6]1(-[#8;-]):[#6](-[#6]-[#6]=[#6](-[#6])-[#6]-[#6]-[#6]=[#6](-[#6])-[#6@@](/[#8])-[#6]\\[#6@@]2-[#8]-[#6]-2(-[#6])-[#6]):[#6](-[#8]):[#6](-[#6]=[#8]):[#6](-[#6]):[#6]:1-[Cl]>>[#6]1(-[#8;-]):[#6](-[#6]-[#6]=[#6](-[#6])-[#6]-[#6]-[#6]=[#6](-[#6]2-[#8]-[#6](-[#6])(-[#6])-[#6@@](/[#8])-[#6]-2)-[#6]):[#6](-[#8]):[#6](-[#6]=[#8]):[#6](-[#6]):[#6]:1-[Cl]", "reactions": [ { + "substrate": "C/C(=C\\Cc1c([O-])c(Cl)c(C)c(C=O)c1O)CC/C=C(\\C)[C@@H](O)C[C@@H]1OC1(C)C", "products": [ - "" - ] + "CC(=CCc1c([O-])c(Cl)c(C)c(C=O)c1O)CCC=C(C)C1C[C@H](O)C(C)(C)O1" + ], + "isIntermediate": true } - ] + ], + "evidence": { + "evidenceCode": [ + "In vitro assay", + "Knock-out studies" + ], + "references": [ + "doi:10.1073/pnas.1819254116" + ] + } } ] } \ No newline at end of file From 4ca66daf2dd9361f57be9f154dc512178f06210f Mon Sep 17 00:00:00 2001 From: mite-bot Date: Wed, 20 May 2026 12:50:08 +0200 Subject: [PATCH 3/4] Delete mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json --- .../ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json | 56 ------------------- 1 file changed, 56 deletions(-) delete mode 100644 mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json diff --git a/mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json b/mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json deleted file mode 100644 index 918fa771..00000000 --- a/mite_data/data/ba9a5fec-5165-11f1-9ef6-bb4e59819b6d.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "accession": "MITE9999999", - "status": "pending", - "changelog": [ - { - "version": "1", - "date": "2026-05-16", - "contributors": [ - "0000-0002-0771-9611" - ], - "reviewers": [ - "BBBBBBBBBBBBBBBBBBBBBBBB" - ], - "comment": "New entry." - } - ], - "enzyme": { - "name": "AscI", - "description": "Terpene cyclase", - "references": [ - "doi:10.1073/pnas.1819254116" - ], - "databaseIds": { - "uniprot": "A0A455R4Z0", - "genpept": "BBF25321.1", - "mibig": "BGC0001924" - } - }, - "reactions": [ - { - "tailoring": [ - "Cyclization" - ], - "description": "Converts 16-hydroxy-ilicicolin A epoxide to ascofuranol by cyclisation to form a tetrahydrofuran ring.", - "reactionSMARTS": "[#6]1(-[#8;-]):[#6](-[#6]-[#6]=[#6](-[#6])-[#6]-[#6]-[#6]=[#6](-[#6])-[#6@@](/[#8])-[#6]\\[#6@@]2-[#8]-[#6]-2(-[#6])-[#6]):[#6](-[#8]):[#6](-[#6]=[#8]):[#6](-[#6]):[#6]:1-[Cl]>>[#6]1(-[#8;-]):[#6](-[#6]-[#6]=[#6](-[#6])-[#6]-[#6]-[#6]=[#6](-[#6]2-[#8]-[#6](-[#6])(-[#6])-[#6@@](/[#8])-[#6]-2)-[#6]):[#6](-[#8]):[#6](-[#6]=[#8]):[#6](-[#6]):[#6]:1-[Cl]", - 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Reviewer 1 fixed reaction SMARTS and product, added RHEA ID and EC number, improved reaction descriptions." + } + ], + "enzyme": { + "name": "AscI", + "description": "Terpene cyclase", + "references": [ + "doi:10.1073/pnas.1819254116" + ], + "databaseIds": { + "uniprot": "A0A455R4Z0", + "genpept": "BBF25321.1", + "mibig": "BGC0001924" + } + }, + "reactions": [ + { + "tailoring": [ + "Cyclization" + ], + "description": "Cyclization of meroterpenoid intermediate in the ascofuranone biosynthetic pathway.", + "reactionSMARTS": "[#6]1(-[#8]):[#6](-[#6]-[#6]=[#6](-[#6])-[#6]-[#6]-[#6]=[#6](-[#6])-[#6@@](/[#8])-[#6]\\[#6@@]2-[#8]-[#6]-2(-[#6])-[#6]):[#6](-[#8]):[#6](-[#6]=[#8]):[#6](-[#6]):[#6]:1-[Cl]>>[#6]1(-[#8]):[#6](-[#6]-[#6]=[#6](-[#6])-[#6]-[#6]-[#6]=[#6](-[#6]2-[#8]-[#6](-[#6])(-[#6])-[#6@@](/[#8])-[#6]-2)-[#6]):[#6](-[#8]):[#6](-[#6]=[#8]):[#6](-[#6]):[#6]:1-[Cl]", + "reactions": [ + { + "substrate": "C/C(=C\\Cc1c(O)c(Cl)c(C)c(C=O)c1O)CC/C=C(\\C)[C@@H](O)C[C@@H]1OC1(C)C", + "products": [ + "CC(=CCc1c(O)c(Cl)c(C)c(C=O)c1O)CCC=C(C)C1C[C@H](O)C(C)(C)O1" + ], + "isIntermediate": true, + "description": "Converts 16-hydroxy-ilicicolin A epoxide to ascofuranol by cyclisation to form a tetrahydrofuran ring." + } + ], + "evidence": { + "evidenceCode": [ + "In vitro assay", + "Knock-out studies" + ], + "references": [ + "doi:10.1073/pnas.1819254116" + ] + }, + "databaseIds": { + "rhea": "63108", + "ec": "5.4.99" + } + } + ] +} \ No newline at end of file