Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Develop API endpoint for ontology checking -runtime #891

Open
mslarae13 opened this issue Feb 5, 2025 · 0 comments
Open

Develop API endpoint for ontology checking -runtime #891

mslarae13 opened this issue Feb 5, 2025 · 0 comments

Comments

@mslarae13
Copy link

mslarae13 commented Feb 5, 2025

API developed to look at a string representation that is an ontology term and check that string against an authority

Needs to check both postgres and mongo and allow for a .json file to be submitted (in the format that a file is for .json submit). So, endpoint would need to be in -server and -runtime (see microbiomedata/nmdc-server#1537)

This should be completed after 1537.

Ideally, the endpoint will function similar to this endpoint

Where we can identify a single submission as needed, or pull all existing samples (could be filtered based on some attribute, like sample type)

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant