-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathconvert.py
162 lines (155 loc) · 5.36 KB
/
convert.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
import csv
from sys import argv
import os
def dataprep(row):
"""
== basicData ==
0 -> part1
1 -> part2
2 -> part3
3 -> accessionDate
4 -> acquisitionType
5 -> userDefinedReal1
6 -> extentNumber
7 -> extentType
8 -> title
9 -> description
10 -> cataloged
11 -> nameLinkFunction
== corporateName1 ==
12 -> nameType
13 -> corporatePrimaryName
14 -> corporateSubordinate1
15 -> corporateSubordinate2
== corporateName2 ==
16 -> nameType
17 -> corporatePrimaryName
== personName1 ==
18 -> nameType
19 -> personalPrimaryName
20 -> personalRestOfName
21 -> personalPrefix
22 -> personalSuffix
== personName2 ==
23 -> nameType
24 -> personalPrimaryName
25 -> personalRestOfName
26 -> personalPrefix
27 -> personalSuffix
"""
header = ('part1', 'part2', 'part3', 'accessionDate', 'acquisitionType', 'userDefinedReal1',
'extentNumber', 'extentType', 'title', 'description', 'cataloged', 'nameLinkFunction', 'nameType',
'corporatePrimaryName', 'corporateSubordinate1', 'corporateSubordinate2', 'nameType', 'corporatePrimaryName',
'nameType', 'personalPrimaryName', 'personalRestOfName', 'personalPrefix', 'personalSuffix',
'nameType', 'personalPrimaryName', 'personalRestOfName', 'personalPrefix', 'personalSuffix')
basicData = dict(zip(header[0:12], row[0:12]))
if "$" in basicData['userDefinedReal1']: basicData['userDefinedReal1'] = basicData['userDefinedReal1'].replace('$', '')
basicData['cataloged'] = basicData['cataloged'].lower()
corportateName1 = dict(zip(header[12:16], row[12:16]))
corportateName2 = dict(zip(header[16:18], row[16:18]))
personName1 = dict(zip(header[18:23], row[18:23]))
personName2 = dict(zip(header[23:], row[23:]))
data = {'basicData':basicData, 'corportateName1':corportateName1, 'corportateName2':corportateName2,
'personName1':personName1, 'personName2':personName2}
return data
def xmloutput(source):
header = """<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<accessionRecords xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
"""
footer = "</accessionRecords>"
basicdata = """
<record>
<accessionNumber>
<part1>%(part1)s</part1>
<part2>%(part2)s</part2>
<part3>%(part3)s</part3>
</accessionNumber>
<accessionDate>%(accessionDate)s</accessionDate>
<title>%(title)s</title>
<acquisitionType>%(acquisitionType)s</acquisitionType>
<userDefinedReal1>%(userDefinedReal1)s</userDefinedReal1>
<extentNumber>%(extentNumber)s</extentNumber>
<extentType>%(extentType)s</extentType>
<description>%(description)s</description>
<cataloged>%(cataloged)s</cataloged>
"""
personName = """
<nameLink>
<nameLinkFunction>Source</nameLinkFunction>
<name>
<nameType>Person</nameType>
<personalPrimaryName>%(personalPrimaryName)s</personalPrimaryName>
<personalRestOfName>%(personalRestOfName)s</personalRestOfName>
<personalPrefix>%(personalPrefix)s</personalPrefix>
<personalSuffix>%(personalSuffix)s</personalSuffix>
</name>
</nameLink>"""
corportateName1 = """
<nameLink>
<nameLinkFunction>Source</nameLinkFunction>
<name>
<nameType>%(nameType)s</nameType>
<corporatePrimaryName>%(corporatePrimaryName)s</corporatePrimaryName>
<corporateSubordinate1>%(corporateSubordinate1)s</corporateSubordinate1>
<corporateSubordinate2>%(corporateSubordinate2)s</corporateSubordinate2>
</name>
</nameLink>"""
corportateName2 = """
<nameLink>
<nameLinkFunction>Source</nameLinkFunction>
<name>
<nameType>%(nameType)s</nameType>
<corporatePrimaryName>%(corporatePrimaryName)s</corporatePrimaryName>
<corporateSubordinate1></corporateSubordinate1>
<corporateSubordinate2></corporateSubordinate2>
</name>
</nameLink>"""
sourceReader = csv.reader(open(source, 'r'), delimiter="\t", quotechar='"')
output = open(os.path.splitext(source)[0] + '.xml', 'w')
stream = ''
stream += header
sourceReader.next() # skips header row.
for row in sourceReader:
data = dataprep(row)
stream += basicdata % data['basicData']
if data['corportateName1']['nameType']:
stream += corportateName1 % data['corportateName1']
if data['corportateName2']['nameType']:
stream += corportateName2 % data['corportateName2']
if data['personName1']['nameType']:
stream += personName % data['personName1']
if data['personName2']['nameType']:
stream += personName % data['personName2']
stream += '</record>\n'
stream += footer
output.write(stream)
output.close()
if __name__ == "__main__":
try:
arguments = argv[1:]
if argv[1] == '*':
try:
os.mkdir('completed')
except OSError:
pass
filelist = [x for x in os.listdir('.') if os.path.splitext(x)[1] in ['.txt', '.tab']]
for tabfile in filelist:
xmloutput(tabfile)
os.rename(tabfile, 'completed/'+tabfile)
else:
try:
os.mkdir('completed')
except OSError:
pass
for tabfile in argv[1:]:
xmloutput(tabfile)
os.rename(tabfile, 'completed/'+tabfile)
except IndexError:
try:
os.mkdir('completed')
except OSError:
pass
filelist = [x for x in os.listdir('.') if os.path.splitext(x)[1] in ['.txt', '.tab']]
for tabfile in filelist:
xmloutput(tabfile)
os.rename(tabfile, 'completed/'+tabfile)