From f9c2547ef420bbc5ec19172aa1ebe572025043c0 Mon Sep 17 00:00:00 2001 From: MazzaLab Date: Sat, 18 May 2024 20:13:10 +0200 Subject: [PATCH] Update Singularity.def fixed Singularity main file --- Singularity.def | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/Singularity.def b/Singularity.def index 39e3f6b..fc17ebc 100644 --- a/Singularity.def +++ b/Singularity.def @@ -13,7 +13,6 @@ From: condaforge/mambaforge PATH=$PATH:/tmp/jre1.8.0_161/bin/ %post - mamba config --set channel_priority strict mamba install python=3.10 mamba install -c conda-forge -c bioconda snakemake=7.32.3 -y mamba install -c conda-forge colorama click -y @@ -44,4 +43,4 @@ From: condaforge/mambaforge else echo "You must provide three + 2 optional arguments [computing mode ('paired' or 'single'), # of cores (int), sample name (string), chunk size (optional, int), ASCII offset (optional, 33 or 64)]" exit 1 - fi \ No newline at end of file + fi