Skip to content

Reads not being used with lower uniting abundance #23

@skoren

Description

@skoren

I ran MBG v1.0.14 with the same input corrected HiFi reads, the first run used --unitig-abundance 2 while the second one used --unitig-abundance 4. The run with the higher abundance has an example of about 30 reads which are completely missing in the other run. These reads are near the end of the chromosome and telomeric and extend the assembly by about 10kb. The reads are on globus under MBG_ missing_reads folder.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions