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SiSp model have some problem:Could not load .tbi/.csi index of example/meth_file #172

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Licko0909 opened this issue Apr 26, 2019 · 0 comments
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@Licko0909
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Licko0909 commented Apr 26, 2019

Could not load .tbi/.csi index of example/meth_file

Hello, I recently used kipoi to solve some problems. I tried to use the recently released SiSp model and there were some problems.

I used the CLI method and the python method recommended by the kipoi official website. The above mentioned problems always appear during the test.

import kipoi
model = kipoi.get_model('SiSp')
pred = model.pipeline.predict_example()
# Download example dataloader kwargs
dl_kwargs = model.default_dataloader.download_example('example')
# Get the dataloader and instantiate it
dl = model.default_dataloader(**dl_kwargs)
# get a batch iterator
it = dl.batch_iter(batch_size=4)
# predict for a batch
batch = next(it)
model.predict_on_batch(batch['inputs'])

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@Licko0909 Licko0909 changed the title SiSp model have some problem SiSp model have some problem:Could not load .tbi/.csi index of example/meth_file Apr 27, 2019
@haimasree haimasree added the bug label Apr 9, 2021
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