Issues

• Is kevlar able to detect duplications/repeat expansions and in general CNV?

  kevlar-dev/kevlar#388 · Filter by author ashenflower opened on Oct 27, 2021
  1

• > 30,000 variants reported from trio-analysis with FPR 0.001?

  kevlar-dev/kevlar#386 · Filter by author moldach opened on Dec 16, 2020
  6

• count_control error: estimated false positive rate is 0.385 (FPR too high, bailing out!!!

  kevlar-dev/kevlar#385 · Filter by author moldach opened on Oct 26, 2020
  5

• Kevlar novel multithreading

  kevlar-dev/kevlar#384 · Filter by author ghost opened on Jul 6, 2020
  2

• VCF Parsing Issue

  bug
  kevlar-dev/kevlar#381 · Filter by author 17tranap opened on Jun 24, 2020
  1

• kevlar memory error

  kevlar-dev/kevlar#378 · Filter by author sph17 opened on Apr 22, 2020
  2

• Clarification - how to avoid high FPR

  kevlar-dev/kevlar#377 · Filter by author exeter-matthew-wakeling opened on Feb 26, 2020
  3

• Empty files produced by kevlar split cause crash of kevlar assemble

  kevlar-dev/kevlar#374 · Filter by author serosko opened on Nov 25, 2019
  3

• Command or script for inspecting ambiguous calls

  enhancement
  kevlar-dev/kevlar#364 · Filter by author standage opened on Mar 21, 2019

• Can kevlar work with 10s-100s of bacterial genomes?

  question
  kevlar-dev/kevlar#281 · Filter by author tseemann opened on Jul 17, 2018
  1

• Compose control counttables for kevlar novel step

  optimization
  kevlar-dev/kevlar#275 · Filter by author standage opened on Jun 18, 2018
  2

• Re-evaluate impact of error correction

  optimization
  kevlar-dev/kevlar#273 · Filter by author standage opened on Jun 18, 2018

• [Meta] Memory and runtime performance improvements

  optimization
  kevlar-dev/kevlar#272 · Filter by author standage opened on Jun 18, 2018
  1

• Titus' thoughts about "user experience"

  kevlar-dev/kevlar#258 · Filter by author standage opened on May 1, 2018
  2

• Filtering reads with ambiguous content

  accuracyenhancement
  kevlar-dev/kevlar#213 · Filter by author standage opened on Feb 23, 2018

• Investigate using minimizers to reduce memory while searching for interesting k-mers

  optimization
  kevlar-dev/kevlar#211 · Filter by author standage opened on Feb 15, 2018

• Buffer abundance queries in kevlar novel

  optimization
  kevlar-dev/kevlar#208 · Filter by author standage opened on Feb 10, 2018

• Tutorial: AssertionError: Your sequence must be DNA!

  kevlar-dev/kevlar#164 · Filter by author johnsolk opened on Nov 5, 2017
  2

• Profiling results

  accuracyoptimization
  kevlar-dev/kevlar#84 · Filter by author standage opened on Jun 13, 2017
  2

• Report kevlar version when running a script

  kevlar-dev/kevlar#61 · Filter by author standage opened on Mar 31, 2017
  3

• Write k-mers to banded counttables in a single pass

  kevlar-dev/kevlar#31 · Filter by author standage opened on Feb 1, 2017
  1

• Support arbitrary numbers of cases

  kevlar-dev/kevlar#30 · Filter by author standage opened on Jan 28, 2017
  1

• Test impact of memory size on performance

  kevlar-dev/kevlar#19 · Filter by author standage opened on Dec 22, 2016