Workspace query testing

Merge pull request #133 from kbase/simplify-related-objs-query

Remove show_private and show_public params; return the root object data and type

Workspace query for related objects

Merge pull request #132 from kbase/add-workspace-query

Add workspace query for related objects

Additional generic ontology queries

Merge pull request #131 from zhlu9890/develop

add more ontology queries

Ontology query fixes

Merge pull request #130 from zhlu9890/develop

update queries to make GO and ontology consistent

Add generic ontology queries

Merge pull request #129 from zhlu9890/develop

adding generic ontology queries

Change data source name "gtdb_taxonomy" to "gtdb"

Merge pull request #126 from kbase/fix-gtdb-data-source-name

Change data source name of "gtdb_taxonomy" to "gtdb"

Add taxonomy_search_species query

Merge pull request #125 from kbase/species-query

Species/strain query

2.2.0: Merge pull request #124 from kbase/search-taxa-no-count

Add a "no_count" option for the "taxonomy_search_sci_name" query.

Add generic taxonomy queries

Take all ncbi_* prefixed taxonomy queries and make them generic for any taxonomy, where you can pass in the taxon vertex name, taxon parent-child edge name, and the scientific name field name. Works with both NCBI and GTDB taxonomy currently.

2.0.10: Merge pull request #121 from kbase/fix-stored-query

Fix stored query; move WITH clause into prefix