Cannot install scalop

[fieldima]

I am trying to install your other package, infercna, which is dependent on this package, scalop. But I keep running into this error:

nd.c:24:10: fatal error: S.h: No such file or directory
24 | #include "S.h"
| ^~~~~

I see there was a previous issue about this same problem that hasn't been solved, are there any updates?

@fieldima Identical problem. Have been working on this for 2 hours. Installed entirely new version of R, fortran, etc. @jlaffy any updates?

@fieldima did you have any luck? At this point I could've written the functionality myself in less time.

[HeikoZhang1122]

I successfully installed this package, after installing "Homo.sapiens" package via Biocmanager

[ABU-TO]

nd.c:24:10: fatal error: S.h: No such file or directory
24 | #include "S.h"
| ^~~~~
compilation terminated.
make: *** [{####}/anaconda3/envs/R_423/lib/R/etc/Makeconf:171: nd.o] Error 1
ERROR: compilation failed for package ‘scalop’

• removing ‘{####}/anaconda3/envs/R_423/lib/R/library/scalop’
  Warning message:
  In i.p(...) :
  安装程序包‘/tmp/Rtmp0Ay16n/file6a9447fad5e8/scalop_1.1.0.tar.gz’时退出狀態的值不是0

/

same error in R 4.2.3
need your help!!!

[dcy-Sundar]

nd.c:24:10: fatal error: S.h: No such file or directory 24 | #include "S.h" | ^~~~~ compilation terminated. make: *** [{####}/anaconda3/envs/R_423/lib/R/etc/Makeconf:171: nd.o] Error 1 ERROR: compilation failed for package ‘scalop’

• removing ‘{####}/anaconda3/envs/R_423/lib/R/library/scalop’
  Warning message:
  In i.p(...) :
  安装程序包‘/tmp/Rtmp0Ay16n/file6a9447fad5e8/scalop_1.1.0.tar.gz’时退出狀態的值不是0

/

same error in R 4.2.3 need your help!!!

I have the same error with you!!! Did you find a solution?

[yeswzc]

I have the same issue and found this seems should work but it didn't work after I tried using M2 chip apple Mac.

But the author provided this:
BiocManager::install("Homo.sapiens")
BiocManager::install("jpmam1/scalop")
which I can install succesfully.

[JeanRadig]

For R>=4, installing scalop using Boeva's lab forked repo worked for me:

install.packages("remotes")
remotes::install_github("BoevaLab/scalop")