From 6d3e4c3ceeb4d2c5e170474d04dacfdfc7d95312 Mon Sep 17 00:00:00 2001 From: k-dominik Date: Tue, 3 Feb 2026 19:33:46 +0100 Subject: [PATCH 1/3] bump version --- .bumpversion.cfg | 2 +- setup.py | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/.bumpversion.cfg b/.bumpversion.cfg index d5d5cf71..a3f66686 100644 --- a/.bumpversion.cfg +++ b/.bumpversion.cfg @@ -1,5 +1,5 @@ [bumpversion] -current_version = 25.4.0 +current_version = 26.2.0 parse = (?P\d+)\.(?P\d+)\.(?P\d+)((?P[a-z]+)?(?P\d+)?)? serialize = {year}.{month}.{number}{release} diff --git a/setup.py b/setup.py index 0de08877..eecb8e62 100644 --- a/setup.py +++ b/setup.py @@ -11,7 +11,7 @@ setup( name="tiktorch", - version="25.4.0", + version="26.2.0", description="Tiktorch client/server", long_description=long_description, long_description_content_type="text/markdown", @@ -28,7 +28,7 @@ packages=find_packages(exclude=["tests"]), # Required install_requires=[ "bioimageio.spec", - "bioimageio.core==0.8.0", + "bioimageio.core==0.9.5", "grpcio>=1.31", "numpy>=1.21,<3", "protobuf", From ea420e58a00cbfa5c58516d428ea736a8baaf7ef Mon Sep 17 00:00:00 2001 From: k-dominik Date: Wed, 4 Feb 2026 14:07:38 +0100 Subject: [PATCH 2/3] Fix torch Sampler arg deprecation --- tiktorch/server/datasets.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/tiktorch/server/datasets.py b/tiktorch/server/datasets.py index 1defbe82..3ad93731 100644 --- a/tiktorch/server/datasets.py +++ b/tiktorch/server/datasets.py @@ -129,7 +129,7 @@ class DynamicWeightedRandomSampler(Sampler): def __init__(self, dataset: DynamicDataset) -> None: self._dataset = dataset - super().__init__(dataset) + super().__init__() def __iter__(self): while True: @@ -153,7 +153,7 @@ class DynamicWeightedRandomPyBioSampler(Sampler): def __init__(self, dataset: DynamicDataset) -> None: self._dataset = dataset - super().__init__(dataset) + super().__init__() def __iter__(self): while True: From 2c2368938b43fee1d082468b932747dd5ed11be0 Mon Sep 17 00:00:00 2001 From: k-dominik Date: Wed, 4 Feb 2026 14:59:57 +0100 Subject: [PATCH 3/3] [CI]: fix warnings with setup-miniconda remove deprecated keywords --- .github/workflows/ci.yml | 6 ++---- 1 file changed, 2 insertions(+), 4 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index c87ede2c..7843e59b 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -21,7 +21,6 @@ jobs: - uses: conda-incubator/setup-miniconda@v3 with: auto-update-conda: true - auto-activate-base: false activate-environment: tiktorch-server-env environment-file: environment.yml conda-remove-defaults: "true" @@ -49,7 +48,6 @@ jobs: - uses: conda-incubator/setup-miniconda@v3 with: auto-update-conda: true - auto-activate-base: false activate-environment: tiktorch-server-env environment-file: environment.yml conda-remove-defaults: "true" @@ -90,7 +88,7 @@ jobs: - uses: conda-incubator/setup-miniconda@v3 with: auto-update-conda: true - auto-activate-base: true + activate-environment: base channels: conda-forge conda-remove-defaults: "true" channel-priority: strict @@ -136,7 +134,7 @@ jobs: - uses: conda-incubator/setup-miniconda@v3 with: auto-update-conda: true - auto-activate-base: true + activate-environment: base channel-priority: strict conda-remove-defaults: "true" miniforge-variant: Miniforge3