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put publish dir logic into main config file #33

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riederd opened this issue Feb 1, 2022 · 0 comments
Open

put publish dir logic into main config file #33

riederd opened this issue Feb 1, 2022 · 0 comments

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@riederd
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riederd commented Feb 1, 2022

nf-deseq2/modules/VolcanoPlot.nf

Line 9 in 9910dc2

publishDir "${out_dir}", mode: "$mode"

It would be nice to have the publish dir settings in nextflow.config, e.g.:

withName: VolcanoPlot { publishDir = [path: params.resDir + '/VolcanoPlots', mode: params.publish_dir_mode] }
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