put some paper-refs

Author: drseb

software-phenix.md

@@ -8,6 +8,12 @@ pathogenicity as well as phenotypic similarity of diseases associated with the g
 phenotypic profile of the individual being investigated, based on analysis 
 powered by the Human Phenotype Ontology (HPO). 
 
-The method has been published in Science Translational Medicine. The tool is available on [this website](http://compbio.charite.de/PhenIX/).
+The method has been published in Science Translational Medicine:
+
+    Effective diagnosis of genetic disease by computational phenotype analysis of the disease-associated genome
+    Zemojtel T*, Köhler S*, Mackenroth L*, Jäger M, Hecht J, Krawitz P, Graul-Neumann L, Doelken S, Ehmke N, Spielmann M, Oien NC, Schweiger MR, Krüger U, Frommer G, Fischer B, Kornak U, Flöttmann R, Ardeshirdavani A, Moreau Y, Lewis SE, Haendel M, Smedley D, Horn D, Mundlos S, Robinson PN.
+    Sci Transl Med. 2014 Sep 3;6(252):252ra123. doi: 10.1126/scitranslmed.3009262.
+    
+The tool is available on [this website](http://compbio.charite.de/PhenIX/).
 
 

software-phenomizer.md

@@ -11,3 +11,12 @@ and the disease match to each other. Further details can be found in the publica
 
 The software is [available here](http://compbio.charite.de/phenomizer).
 
+There is also a beta-version of Phenomizer-Orphanet available. Test it and give feedback here: [http://compbio.charite.de/phenomizer_orphanet](http://compbio.charite.de/phenomizer_orphanet).
+
+Phenomizer has been published here:
+
+    Clinical diagnostics in human genetics with semantic similarity searches in ontologies.
+    Köhler S, Schulz MH, Krawitz P, Bauer S, Dölken S, Ott CE, Mundlos C, Horn D, Mundlos S, Robinson PN.
+    Am J Hum Genet. 2009 Oct;85(4):457-64. doi: 10.1016/j.ajhg.2009.09.003.
+    
+