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‎documentation/programs/dials_cosym.html‎

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@@ -281,7 +281,7 @@ <h2>Example<a class="headerlink" href="#example" title="Link to this heading">¶
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The following parameters have been modified:
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‎documentation/tutorials/mpro_x0692.html‎

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@@ -79,7 +79,7 @@ <h3>Import<a class="headerlink" href="#import" title="Link to this heading">¶</
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</div>
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<p>The output just describes what the software understands of the images it was
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passed, in this case one sequence of data containing 400 images:</p>
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<div class="highlight-none notranslate"><div class="highlight"><pre><span></span>DIALS 3.dev.1272-gc3eb48f2d
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The following parameters have been modified:
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<span class="linenos"> 2</span>The following parameters have been modified:
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<span class="linenos"> 3</span>
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<span class="linenos"> 4</span>spotfinder {
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<div class="highlight-none notranslate"><div class="highlight"><pre><span></span><span class="linenos"> 1</span>DIALS 3.dev.1272-gc3eb48f2d
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<span class="linenos"> 2</span>The following parameters have been modified:
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<span class="linenos"> 3</span>
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<span class="linenos"> 4</span>input {
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<div class="highlight-none notranslate"><div class="highlight"><pre><span></span><span class="linenos"> 1</span>DIALS 3.dev.1272-gc3eb48f2d
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<span class="linenos"> 2</span>The following parameters have been modified:
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<span class="linenos"> 3</span>
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<span class="linenos"> 4</span>refinement {
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<div class="highlight-none notranslate"><div class="highlight"><pre><span></span><span class="linenos"> 1</span>DIALS 3.dev.1272-gc3eb48f2d
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<span class="linenos"> 2</span>The following parameters have been modified:
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<div class="highlight-none notranslate"><div class="highlight"><pre><span></span><span class="linenos"> 1</span>DIALS 3.dev.1272-gc3eb48f2d
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<span class="linenos"> 2</span>The following parameters have been modified:
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<span class="linenos"> 3</span>integration {
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<span class="linenos"> 4</span> mp {
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<span class="linenos"> 548</span>
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<span class="linenos"> 549</span>Timing information for reference profile formation
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<span class="linenos"> 550</span>+-------------------+---------------+
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<span class="linenos"> 551</span>| Read time | 17.85 seconds |
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<span class="linenos"> 552</span>| Extract time | 0.41 seconds |
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<span class="linenos"> 551</span>| Read time | 17.82 seconds |
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<span class="linenos"> 552</span>| Extract time | 0.38 seconds |
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<span class="linenos"> 553</span>| Pre-process time | 0.02 seconds |
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<span class="linenos"> 554</span>| Process time | 9.28 seconds |
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<span class="linenos"> 554</span>| Process time | 9.23 seconds |
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<span class="linenos"> 556</span>| Total time | 27.67 seconds |
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<span class="linenos"> 556</span>| Total time | 27.59 seconds |
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<span class="linenos"> 557</span>+-------------------+---------------+
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<span class="linenos"> 559</span>================================================================================
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<span class="linenos">1085</span>Timing information for integration
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<span class="linenos">1086</span>+-------------------+----------------+
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<span class="linenos">1087</span>| Read time | 23.70 seconds |
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<span class="linenos">1088</span>| Extract time | 7.81 seconds |
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<span class="linenos">1089</span>| Pre-process time | 0.27 seconds |
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<span class="linenos">1090</span>| Process time | 141.35 seconds |
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<span class="linenos">1087</span>| Read time | 21.42 seconds |
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<span class="linenos">1088</span>| Extract time | 6.59 seconds |
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<span class="linenos">1089</span>| Pre-process time | 0.26 seconds |
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<span class="linenos">1090</span>| Process time | 138.49 seconds |
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<span class="linenos">1092</span>| Total time | 174.24 seconds |
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<span class="linenos">1092</span>| Total time | 167.85 seconds |
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<span class="linenos">1093</span>+-------------------+----------------+
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<span class="linenos">1095</span>Removing 22844 unintegrated reflections of 199389 total
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<span class="linenos"> 2</span>The following parameters have been modified:
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<span class="linenos"> 2</span>The following parameters have been modified:
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<span class="linenos"> 4</span> experiments = symmetrized.expt
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<span class="linenos"> 67</span>Components to be refined in this cycle for all datasets: scale, decay, absorption
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<span class="linenos"> 68</span>Performing a round of scaling with an LBFGS minimizer.
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<span class="linenos"> 70</span>Time taken for refinement 7.74
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<span class="linenos"> 70</span>Time taken for refinement 7.66
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<span class="linenos"> 72</span>Refinement steps:
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<span class="linenos"> 73</span>+--------+--------+----------+
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<span class="linenos">147</span>Performing a round of scaling with an LBFGS minimizer.
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<span class="linenos">149</span>Time taken for refinement 2.84
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<span class="linenos">151</span>Refinement steps:
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<span class="linenos">152</span>+--------+--------+----------+
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<span class="linenos">210</span>Performing a round of scaling with a Levenberg-Marquardt minimizer.
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<span class="linenos">212</span>Time taken for refinement 4.27
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<span class="linenos">214</span>Refinement steps:
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<span class="linenos">215</span>+--------+--------+----------+
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<span class="linenos">234</span>Performing a round of scaling with a Levenberg-Marquardt minimizer.
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<span class="linenos">236</span>Time taken for refinement 0.88
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<span class="linenos">238</span>Refinement steps:
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<span class="linenos">286</span>Total time taken: 21.1864s
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<span class="linenos">286</span>Total time taken: 20.9045s
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<span class="linenos">288</span>================================================================================
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