Merge branch 'master' into zarr-upload-no-acl

Author: yarikoptic

.github/workflows/docs.yml

@@ -24,7 +24,7 @@ jobs:
         fetch-depth: 0
 
     - name: Set up Python ${{ matrix.python }}
-      uses: actions/setup-python@v5
+      uses: actions/setup-python@v6
       with:
         python-version: ${{ matrix.python }}
 

.github/workflows/labels.yml

@@ -9,7 +9,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Check PR Labels
-        uses: actions/github-script@v7
+        uses: actions/github-script@v8
         with:
           script: |
             const allowedPattern = /^(major|minor|patch|performance|internal|documentation|tests|dependencies)$/;

.github/workflows/lint.yml

@@ -13,7 +13,7 @@ jobs:
       with:
         fetch-depth: 0
     - name: Set up Python
-      uses: actions/setup-python@v5
+      uses: actions/setup-python@v6
       with:
         python-version: '3.9'
     - name: Install dependencies

.github/workflows/release.yml

@@ -24,7 +24,7 @@ jobs:
           chmod a+x ~/auto
 
       - name: Set up Python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: 3.9
 

.github/workflows/run-tests.yml

@@ -68,7 +68,7 @@ jobs:
         fetch-depth: 0
 
     - name: Set up Python ${{ matrix.python }}
-      uses: actions/setup-python@v5
+      uses: actions/setup-python@v6
       with:
         python-version: ${{ matrix.python }}
 

.github/workflows/typing.yml

@@ -14,7 +14,7 @@ jobs:
           fetch-depth: 0
 
       - name: Set up Python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: '3.9'
 

CHANGELOG.md

@@ -1,3 +1,70 @@
+# 0.71.4 (Wed Sep 17 2025)
+
+#### 🐛 Bug Fix
+
+- Add a "common paper wasp" species [#1705](https://github.com/dandi/dandi-cli/pull/1705) ([@yarikoptic](https://github.com/yarikoptic))
+
+#### 🏠 Internal
+
+- [gh-actions](deps): Bump actions/github-script from 7 to 8 [#1702](https://github.com/dandi/dandi-cli/pull/1702) ([@dependabot[bot]](https://github.com/dependabot[bot]))
+- [gh-actions](deps): Bump actions/setup-python from 5 to 6 [#1703](https://github.com/dandi/dandi-cli/pull/1703) ([@dependabot[bot]](https://github.com/dependabot[bot]))
+
+#### Authors: 2
+
+- [@dependabot[bot]](https://github.com/dependabot[bot])
+- Yaroslav Halchenko ([@yarikoptic](https://github.com/yarikoptic))
+
+---
+
+# 0.71.3 (Thu Aug 28 2025)
+
+#### 🧪 Tests
+
+- Run dandi-archive celery worker with `uv` [#1698](https://github.com/dandi/dandi-cli/pull/1698) ([@mvandenburgh](https://github.com/mvandenburgh))
+
+#### Authors: 1
+
+- Mike VanDenburgh ([@mvandenburgh](https://github.com/mvandenburgh))
+
+---
+
+# 0.71.2 (Mon Aug 25 2025)
+
+#### 🐛 Bug Fix
+
+- Add tagging to zarr upload if embargoed [#1685](https://github.com/dandi/dandi-cli/pull/1685) ([@jjnesbitt](https://github.com/jjnesbitt))
+- BF: check for upload to not have our .dandidownload suffixes [#1645](https://github.com/dandi/dandi-cli/pull/1645) ([@yarikoptic](https://github.com/yarikoptic) [@CodyCBakerPhD](https://github.com/CodyCBakerPhD))
+
+#### Authors: 3
+
+- Cody Baker ([@CodyCBakerPhD](https://github.com/CodyCBakerPhD))
+- Jacob Nesbitt ([@jjnesbitt](https://github.com/jjnesbitt))
+- Yaroslav Halchenko ([@yarikoptic](https://github.com/yarikoptic))
+
+---
+
+# 0.71.1 (Mon Aug 25 2025)
+
+#### 🐛 Bug Fix
+
+- Bring back dandi-staging to provide more graceful transition for 3rd party libraries [#1694](https://github.com/dandi/dandi-cli/pull/1694) ([@yarikoptic](https://github.com/yarikoptic) [@CodyCBakerPhD](https://github.com/CodyCBakerPhD))
+- Fix EMBER-DANDI Sandbox url [#1693](https://github.com/dandi/dandi-cli/pull/1693) ([@NEStock](https://github.com/NEStock))
+- Add ndx-events and ndx-hed into our "extensions" extra [#1691](https://github.com/dandi/dandi-cli/pull/1691) ([@yarikoptic](https://github.com/yarikoptic) [@CodyCBakerPhD](https://github.com/CodyCBakerPhD))
+
+#### 🧪 Tests
+
+- Register a Pytest plugin, instead of relying on a root "conftest.py" [#1687](https://github.com/dandi/dandi-cli/pull/1687) ([@brianhelba](https://github.com/brianhelba) [@yarikoptic](https://github.com/yarikoptic))
+- BF: announce two tests xfail on windows python 3.13 [#1690](https://github.com/dandi/dandi-cli/pull/1690) ([@yarikoptic](https://github.com/yarikoptic))
+
+#### Authors: 4
+
+- Brian Helba ([@brianhelba](https://github.com/brianhelba))
+- Cody Baker ([@CodyCBakerPhD](https://github.com/CodyCBakerPhD))
+- Nicole Stock Tregoning ([@NEStock](https://github.com/NEStock))
+- Yaroslav Halchenko ([@yarikoptic](https://github.com/yarikoptic))
+
+---
+
 # 0.71.0 (Fri Aug 22 2025)
 
 #### 🚀 Enhancement

dandi/cli/tests/test_cmd_validate.py

@@ -4,6 +4,7 @@
 import pytest
 
 from ..cmd_validate import _process_issues, validate
+from ...tests.xfail import mark_xfail_windows_python313_posixsubprocess
 from ...validate_types import (
     Origin,
     OriginType,
@@ -77,6 +78,7 @@ def test_validate_ignore(simple2_nwb: Path) -> None:
     assert "DANDI.NO_DANDISET_FOUND" not in r.output
 
 
+@mark_xfail_windows_python313_posixsubprocess
 def test_validate_nwb_path_grouping(organized_nwb_dir4: Path) -> None:
     """
     Does grouping of issues by path work?

dandi/cli/tests/test_instances.py

@@ -19,12 +19,15 @@ def test_cmd_instances(monkeypatch):
         "dandi-sandbox:\n"
         "  api: https://api.sandbox.dandiarchive.org/api\n"
         "  gui: https://sandbox.dandiarchive.org\n"
+        "dandi-staging:\n"
+        "  api: https://api.sandbox.dandiarchive.org/api\n"
+        "  gui: https://sandbox.dandiarchive.org\n"
         "ember:\n"
         "  api: https://api-dandi.emberarchive.org/api\n"
         "  gui: https://dandi.emberarchive.org\n"
         "ember-sandbox:\n"
         "  api: https://api-dandi-sandbox.emberarchive.org/api\n"
-        "  gui: https://dandi-sandbox.emberarchive.org\n"
+        "  gui: https://apl-setup--ember-dandi-archive.netlify.app/\n"
         "linc:\n"
         "  api: https://api.lincbrain.org/api\n"
         "  gui: https://lincbrain.org\n"

dandi/consts.py

@@ -122,6 +122,13 @@ def urls(self) -> Iterator[str]:
         "https://dandiarchive.org",
         "https://api.dandiarchive.org/api",
     ),
+    # Deprecated. Remove early 2026.
+    # Should come before dandi-sandbox so _rev map does map to sandbox
+    "dandi-staging": DandiInstance(
+        "dandi-staging",
+        "https://sandbox.dandiarchive.org",
+        "https://api.sandbox.dandiarchive.org/api",
+    ),
     "dandi-sandbox": DandiInstance(
         "dandi-sandbox",
         "https://sandbox.dandiarchive.org",
@@ -149,7 +156,7 @@ def urls(self) -> Iterator[str]:
     ),
     "ember-sandbox": DandiInstance(
         "ember-sandbox",
-        "https://dandi-sandbox.emberarchive.org",
+        "https://apl-setup--ember-dandi-archive.netlify.app/",
         "https://api-dandi-sandbox.emberarchive.org/api",
     ),
 }
@@ -223,3 +230,6 @@ def urls(self) -> Iterator[str]:
 REQUEST_RETRIES = 12
 
 DOWNLOAD_TIMEOUT = 30
+
+#: Suffix used for temporary download directories
+DOWNLOAD_SUFFIX = ".dandidownload"