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spliced sequence extraction #103

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daler opened this issue Oct 11, 2017 · 2 comments
Open

spliced sequence extraction #103

daler opened this issue Oct 11, 2017 · 2 comments
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feature request

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@daler
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daler commented Oct 11, 2017

xref mdshw5/pyfaidx#127
@ewallace
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ewallace commented Feb 5, 2018

Hi Ryan,
I'm just hand-implementing a version of this myself. It would be more sensible to join forces and see if I can accelerate a well-tested version within gffutils.

Where are you at, how can I help?
Edward

@daler
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daler commented Feb 5, 2018

Thanks @ewallace. This issue has been lower priority across my projects, so unfortunately I haven't made any progress. It would be great if you could add something to gffutils, and I'd be happy to help integrate and test.

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@daler @ewallace