cosmo-build can't find its library dependencies

[Krannich479]

Hi,
I currently installed your cosmo-vari branch according to the instructions within the "Building notes" (and changed all paths to my install dir). When I try to run the "Colored de Bruijn graph example" I get stuck at the cosmo-build call:

$cosmo-build -d ecoli6_kmc2_list
cosmo-build: error while loading shared libraries: libboost_system.so.1.54.0: cannot open shared object file: No such file or directory

However, I can find the libboost_system.so.1.54.0 library besides many more in /myPath/cosmo/3rd_party_inst/boost/lib. Apparently cosmo misses the right link to that directory. Any suggestions here? Can I do something to either adjust the bootstrap.sh installation or set some symbolic links somewhere afterwards?

What I already tried:

• retrying the install process
• changing the BOOST_PATH in the cosmo Makefile to the full path until /myPath/cosmo/3rd_party_inst/boost/lib, like above, but this way the build of cosmo fails

Best

[winni2k]

I ran into this too.

Adding the boost lib directory to my LD_LIBRARY_PATH seems to solve this issue:

export LD_LIBRARY_PATH="/pica/h1/winni/proj/cosmo/3rd_party_inst/boost/lib/:$LD_LIBRARY_PATH"

[jermp]

I just run into this problem too.
And I can confirm that doing

 export LD_LIBRARY_PATH="/home/giulio/cosmo/3rd_party_inst/boost/lib/:$LD_LIBRARY_PATH"

works.