Jobfile for vcftobedpe, thanks @mr-c for the heads up

Author: brainstorm

tools/jobs/vcftobedpe-job.json

@@ -0,0 +1,6 @@
+{
+    "input": {
+        "class": "File",
+        "path": "../test-files/APGI2049_Tumor-manta.vcf"
+    },
+}