printrdf: also include the input values

Author: mr-c

cwltool/cwlrdf.py

@@ -11,19 +11,23 @@
 from .process import Process
 
 
-def gather(tool: Process, ctx: ContextType) -> Graph:
+def gather(tool: Process, inputs: Any, ctx: ContextType) -> Graph:
     g = Graph()
 
     def visitor(t: CommentedMap) -> None:
         makerdf(t["id"], t, ctx, graph=g)
 
+    for inp_name in inputs:
+        for inp in tool.tool["inputs"]:
+            if inp["id"].endswith(f"#{inp_name}"):
+                inp["rdf:value"] = inputs[inp_name]
     tool.visit(visitor)
     return g
 
 
-def printrdf(wflow: Process, ctx: ContextType, style: str) -> str:
+def printrdf(wflow: Process, inputs: Any, ctx: ContextType, style: str) -> str:
     """Serialize the CWL document into a string, ready for printing."""
-    rdf = gather(wflow, ctx).serialize(format=style, encoding="utf-8")
+    rdf = gather(wflow, inputs, ctx).serialize(format=style, encoding="utf-8")
     if not rdf:
         return ""
     return str(rdf, "utf-8")

cwltool/main.py

@@ -1149,7 +1149,9 @@ def main(
 
             if args.print_rdf:
                 print(
-                    printrdf(tool, loadingContext.loader.ctx, args.rdf_serializer),
+                    printrdf(
+                        tool, job_order_object, loadingContext.loader.ctx, args.rdf_serializer
+                    ),
                     file=stdout,
                 )
                 return 0