zenodo_template.json

{
    "publication_date": "{image.tag}",
    "creators": [{"name": "CoLoMoTo (Consortium for Logical Models and Tools)"}],
    "communities": [{"identifier": "colomoto"}],
    "description": "<p>This record contains an exportation of the Docker image <strong>colomoto/colomoto-docker:{image.tag}</strong> (see <a href=\"https://github.com/colomoto/colomoto-docker/releases/tag/{image.tag}\" target=\"_blank\" rel=\"noopener\">release notes</a> and <a href=\"https://doi.org/10.5281/zenodo.3718915\" target=\"_blank\" rel=\"noopener\">source record</a>).&nbsp;</p> <p>The image contains a Jupyter lab and notebook environment with pre-installed software related to modeling, analysis, simulation, and inference of qualitative models of biological networks. See <a href=\"https://colomoto.github.io/colomoto-docker\" target=\"_blank\" rel=\"noopener\">https://colomoto.github.io/colomoto-docker</a> for more information.</p> <p>The image can be executed directly using the <code><a href=\"https://github.com/colomoto/colomoto-docker-py\">colomoto-docker</a></code><a href=\"https://github.com/colomoto/colomoto-docker-py\"> command line utility</a>&nbsp; [<a href=\"https://archive.softwareheritage.org/swh:1:dir:1a643c45c1e8e73a55b4da355e7a858b95824026\" target=\"_blank\" rel=\"noopener noreferrer\">swh:1:dir:1a643c45c1e8e73a55b4da355e7a858b95824026</a>] &nbsp;(requires Python and Docker):</p> <p><code>pip install -U colomoto-docker</code><br><code>colomoto-docker --doi [DOI]</code></p> <p>See <a href=\"https://colomoto.github.io/colomoto-docker/docs/usage.html\" target=\"_blank\" rel=\"noopener\">further <code>colomoto-docker</code> usage instructions</a>.</p> <p>Alternatively, the image can be imported using the command <code>docker load</code> with the attached image file:</p> <pre><code>docker load -i image.tar.gz</code></pre> <p>or with the <code>donodo</code> command available at <a href=\"https://github.com/pauleve/donodo\">https://github.com/pauleve/donodo</a>&nbsp;[<a href=\"https://archive.softwareheritage.org/swh:1:dir:3c23b84c86526b41333c09093e56593028e3873b\" target=\"_blank\" rel=\"noopener noreferrer\">swh:1:dir:3c23b84c86526b41333c09093e56593028e3873b</a>]:</p> <pre><code>pip install -U donodo donodo pull [DOI]</code></pre>"
}