fix: main package needs cli dependencies to be included

Author: mrsimpson

.vibe/development-plan-publish-cli.md

@@ -154,6 +154,7 @@ if (args.length === 0) {
 - [x] Fix remaining test failures in MCP server and E2E tests
 - [x] Update all test configurations from old format (web_sources, local_path) to new sources format
 - [x] Fix CLI routing issue - entry point was not properly awaiting imports
+- [x] Fix missing CLI dependencies in main package (commander, chalk, ora)
 
 ### Completed
 

package.json

@@ -50,7 +50,10 @@
     "@codemcp/knowledge-mcp-server": "workspace:*",
     "@modelcontextprotocol/sdk": "^1.19.1",
     "@types/js-yaml": "4.0.9",
-    "js-yaml": "4.1.0"
+    "js-yaml": "4.1.0",
+    "commander": "^12.0.0",
+    "chalk": "^5.3.0",
+    "ora": "^8.0.1"
   },
   "devDependencies": {
     "@modelcontextprotocol/inspector": "0.16.8",