-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathscript_test.sh
executable file
·51 lines (41 loc) · 3.06 KB
/
script_test.sh
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
#!/bin/bash
# GTEx
python3 test_model.py SpliceAI_standard_gtex retina > ../output_test/SpliceAI_standard_gtex.txt
python3 test_model.py SpliceAI_standard_gtex gtex >> ../output_test/SpliceAI_standard_gtex.txt
python3 test_model.py SpliceAI_standard_gtex canonical >> ../output_test/SpliceAI_standard_gtex.txt
# retina
python3 test_model.py SpliceAI_standard_retina retina > ../output_test/SpliceAI_standard_retina.txt
python3 test_model.py SpliceAI_standard_retina gtex >> ../output_test/SpliceAI_standard_retina.txt
python3 test_model.py SpliceAI_standard_retina canonical >> ../output_test/SpliceAI_standard_retina.txt
# Freeze A
python3 test_model.py SpliceAI_freezeA_retina retina > ../output_test/SpliceAI_freezeA_retina.txt
python3 test_model.py SpliceAI_freezeA_retina gtex >> ../output_test/SpliceAI_freezeA_retina.txt
python3 test_model.py SpliceAI_freezeA_retina canonical >> ../output_test/SpliceAI_freezeA_retina.txt
# Freeze B
python3 test_model.py SpliceAI_freezeB_retina retina > ../output_test/SpliceAI_freezeB_retina.txt
python3 test_model.py SpliceAI_freezeB_retina gtex >> ../output_test/SpliceAI_freezeB_retina.txt
python3 test_model.py SpliceAI_freezeB_retina canonical >> ../output_test/SpliceAI_freezeB_retina.txt
# Freeze C
python3 test_model.py SpliceAI_freezeC_retina retina > ../output_test/SpliceAI_freezeC_retina.txt
python3 test_model.py SpliceAI_freezeC_retina gtex >> ../output_test/SpliceAI_freezeC_retina.txt
python3 test_model.py SpliceAI_freezeC_retina canonical >> ../output_test/SpliceAI_freezeC_retina.txt
# Freeze D
python3 test_model.py SpliceAI_freezeD_retina retina > ../output_test/SpliceAI_freezeD_retina.txt
python3 test_model.py SpliceAI_freezeD_retina gtex >> ../output_test/SpliceAI_freezeD_retina.txt
python3 test_model.py SpliceAI_freezeD_retina canonical >> ../output_test/SpliceAI_freezeD_retina.txt
# Freeze E
python3 test_model.py SpliceAI_freezeE_retina retina > ../output_test/SpliceAI_freezeE_retina.txt
python3 test_model.py SpliceAI_freezeE_retina gtex >> ../output_test/SpliceAI_freezeE_retina.txt
python3 test_model.py SpliceAI_freezeE_retina canonical >> ../output_test/SpliceAI_freezeE_retina.txt
# Freeze F
python3 test_model.py SpliceAI_freezeF_retina retina > ../output_test/SpliceAI_freezeF_retina.txt
python3 test_model.py SpliceAI_freezeF_retina gtex >> ../output_test/SpliceAI_freezeF_retina.txt
python3 test_model.py SpliceAI_freezeF_retina canonical >> ../output_test/SpliceAI_freezeF_retina.txt
# Freeze none
python3 test_model.py SpliceAI_freezenone_retina retina > ../output_test/SpliceAI_freezenone_retina.txt
python3 test_model.py SpliceAI_freezenone_retina gtex >> ../output_test/SpliceAI_freezenone_retina.txt
python3 test_model.py SpliceAI_freezenone_retina canonical >> ../output_test/SpliceAI_freezenone_retina.txt
# Optimized
python3 test_model.py SpliceAI_optimized_retina retina > ../output_test/SpliceAI_optimized_retina.txt
python3 test_model.py SpliceAI_optimized_retina gtex >> ../output_test/SpliceAI_optimized_retina.txt
python3 test_model.py SpliceAI_optimized_retina canonical >> ../output_test/SpliceAI_optimized_retina.txt