You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Hi, I am trying to convert a h5ad file to Seurat object but am faced with this error can I please please get some help.
This is my inout code :
sceasy::convertFormat("GSE175533_sceasy_hay.h5ad", from="anndata", to="seurat",
outFile='GSE175533_sceasy_hay.rds')
Python Exception Message
Traceback (most recent call last):
File "/python3.9/site-packages/anndata/readwrite/read.py", line 447, in read_h5ad
File "/python3.9/site-packages/anndata/readwrite/read.py", line 502, in _read_args_from_h5ad
File "/python3.9/site-packages/anndata/core/anndata.py", line 2157, in _args_from_dict
AttributeError: 'dict' object has no attribute 'dtype'
Hi, I am trying to convert a h5ad file to Seurat object but am faced with this error can I please please get some help.
This is my inout code :
sceasy::convertFormat("GSE175533_sceasy_hay.h5ad", from="anndata", to="seurat",
outFile='GSE175533_sceasy_hay.rds')
Python Exception Message
Traceback (most recent call last):
File "/python3.9/site-packages/anndata/readwrite/read.py", line 447, in read_h5ad
File "/python3.9/site-packages/anndata/readwrite/read.py", line 502, in _read_args_from_h5ad
File "/python3.9/site-packages/anndata/core/anndata.py", line 2157, in _args_from_dict
AttributeError: 'dict' object has no attribute 'dtype'
── R Traceback
R version 4.1.2
GSE h5ad Data download from : https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE175533
The text was updated successfully, but these errors were encountered: