Added HBP, MCHBP, Packing Similarity and updated ReadMe NO_JIRA

Author: Alex-AMC

.gitignore

@@ -127,3 +127,6 @@ dmypy.json
 
 # Pyre type checker
 .pyre/
+
+# PyCharm
+.idea/

README.md

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-# csd-python-api-scripts
-Example scripts using the CSD Python API
+<img src="assets/csd-python-api-logo.png" width="250px">
+
+# CSD - Python API Scripts
+
+----
+
+A repository containing scripts that have been created to leverage the toolkit found within
+the [CCDC portfolio](https://www.ccdc.cam.ac.uk/solutions/) that are accessible via
+the [CSD-Python API ](https://www.ccdc.cam.ac.uk/solutions/csd-core/components/csd-python-api/).
+
+The purpose of this platform is to distribute knowledge and allow for scientific collaborations. 
+
+> For all support matters please contact [[email protected].]()
+
+## Content 
+
+```graphql
+.
+├─ assets                  # Images for documentation
+├─ example                 # Python scripts 
+├─ LICENSE
+└─ README.md
+```
+
+
+## Downloading Scripts
+
+This section will focus on how to download multiple or individual scripts: 
+
+### 1. Downloading all scripts 
+
+#### TO DO - Add gif of downloading Repo 
+#### TO DO - write instructions on how to download
+
+
+### 2. Downloading individual scripts
+
+#### TO DO - Add gif of downloading single file
+#### TO DO - write instructions on how to download
+
+
+## Running scripts through the CSD-Python API Miniconda installed 
+
+This requires you to already have the CSD-Python API installed. 
+
+##### TODO - Write instructions 

assets/csd-python-api-logo.png

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+# Hydrogen Bond Propensity 
+
+----
+
+[Summary]
+
+## Example 
+
+\#TODO [Output from script]
+
+## Requirements 
+\#TODO [List] 
+
+## Instructions on running
+\#TODO [Example run]
+
+## Author
+\#TODO [Add]