complementron/index.html at gh-pages · ccamrobertson/complementron · GitHub

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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"
"http://www.w3.org/TR/html4/loose.dtd">
<head>
	<title>Elizabeth's Reverse Completementron</title>

	<script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.5.1/jquery.min.js"></script>
	<script type="text/javascript">
	$(function(){
		var app = {
			convert_primer: function($input) {
				var primer = $input.toUpperCase();

				// reverse string by first turning into array
				var reverse_primer = primer.split("").reverse();

				var new_primer = [];

				// read through array and replace each primer with its complement
				for (var i=0;i<reverse_primer.length;i++) {
					if (reverse_primer[i] == "A") {
						new_primer.push("T");
					}else if(reverse_primer[i] == "T") {
						new_primer.push("A");
					}else if(reverse_primer[i] == "G") {
						new_primer.push("C");
					}else if(reverse_primer[i] == "C") {
						new_primer.push("G");
					}
				}

				// change the status of the output field
				$("#output").attr('value',new_primer.join(""));
				if($input.match(/[^ATCGatcg]/)){
					$("#output").addClass('fail');
					$("#output").removeClass('selected');
				} else if ($input.match(/[ATCGatcg]/)) {
					$("#output").addClass('selected');
					$("#output").removeClass('fail');
				} else {
					$("#output").removeClass('fail');
					$("#output").removeClass('selected');
				}

				// fun things
				if ($input == "smiley" || $input == ":-)") {
					$("#smiley").html("<img src=\"http://heksie.com/SmileyVault/gifs/smilies0262.gif\" />");
					$("#output").removeClass('fail');
					$("#output").removeClass('selected');
				} else if ($input == "dna") {
					$("body").css('background-image', 'url(http://3.bp.blogspot.com/_zY7hIwMmNiA/TU9tpDah4RI/AAAAAAAABRw/mUOhIXA6Z8Q/s1600/dnapixels.PNG)');
					$("#container").css('backgroundColor', '#fff');
				} else {
					$("#smiley").html(null);
				}
			}
		}

		//listen on the primer input field for changes
		$('#primer').live('keyup', function() {
			var $f = this;
			app.convert_primer($(this).attr('value'));
		});

	});
	</script>

	<style type="text/css">

		#container {
			padding: 20px;
		}

		.selected {
			background-color:lightyellow;
		}

		.fail {
			background-color:lightpink;
		}

		.field {
			font-size:24px;
			width:300px;
		}

		.left {
			margin-top: 10px;
			padding: 5px 0px 10px 0;
			width: 300px;
			float: left;
		}

		.right {
			margin-top: 10px;
			padding: 5px 0 10px 0px;
			width: 300px;
			float: left;
		}

		.center {
			float:left;
			width:1px;
			padding-left: 20px;
			border-right: 1px dashed #aaa;
			margin-top: 10px;
			margin-right: 20px;
			height: 100px;
		}

		.clear {
			clear: both;
		}

		#smiley {
			padding-left: 5px;
		}

		h1 {
			font-family: Helvetica, Arial, sans-serif;
			margin: 5px 0;
		}

		h2 {
			font-family: Helvetica, Arial, sans-serif;
			margin: 5px 0;
			color: #666;
		}

		body {
			width: 700px;
			margin: 50px auto;
		}

		p {
			border-top: 1px solid #666;
			margin: 5px 0;
			padding: 10px 0 0 0;
			font-family: Helvetica, Arial, sans-serif;
			font-size: 0.9em;
			color: #666;
		}

		#footer {
			margin-top: 10px;
			font-family: Helvetica, Arial, sans-serif;
			font-size: 0.8em;
			color: #666;
		}

	</style>

	<script type="text/javascript">

  var _gaq = _gaq || [];
  _gaq.push(['_setAccount', 'UA-22421728-1']);
  _gaq.push(['_trackPageview']);

  (function() {
    var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true;
    ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js';
    var s = document.getElementsByTagName('script')[0]; s.parentNode.insertBefore(ga, s);
  })();

</script>

</head>
<body>

	<!-- Thanks for checking out the complementron! It is quite simple. Let me know if you like it at cameron at api dot gy -->

	<div id="container">
	<h1>Elizabeth's Reverse Complementron<span id="smiley"></span></h1>
	<p>Hello! Welcome to Elizabeth's Reverse Complementron! Just type or paste in your sequence on the left and Elizabeth's Reverse Complementron will take care of the rest. Voila!</p>

	<div class="left">
		<h2>Sequence</h2>
		<input id="primer" name="primer" value="" class="field" />
	</div>

	<div class="center">
	</div>

	<div class="right">
		<h2>Reverse Complement</h2>
		<input id="output" value="" class="field" />
	</div>

	<div class="clear"></div>

	<div id="footer">Made for Elizabeth</div>
	</div>

</body>
</html>