typos: fix unexpected behaviour

Enable typos.configPath to be of type path. This way, we can
use excludes from .typos.toml when running
`pre-commit run typos --all-files`. Otherwise, the execution
differs from a normal invocation of typos, which is unexpected
and leads to wrong results.

To not break anything, and to be compliant with the existing
API, I modified configPath to be either a Nix path or a string.

[0]: #387 (comment)

Author: phip1611

Diff for: modules/hooks.nix

@@ -1427,10 +1427,11 @@ in
                 description = lib.mdDoc "When to use generate output.";
                 default = "auto";
               };
+            # It is recommended to use `configPath`.
             configuration =
               mkOption {
                 type = types.str;
-                description = lib.mdDoc "Multiline-string configuration passed as config file. If set, config set in `typos.settings.configPath` gets ignored.";
+                description = lib.mdDoc "Multiline-string configuration passed as config file. If set, config set in `typos.settings.config{File|Path}` gets ignored.";
                 default = "";
                 example = ''
                   [files]
@@ -1444,12 +1445,15 @@ in
                 '';
               };
 
+            # It is recommended to use a Nix path here as this way, the excludes
+            # from the config file can be taken into account by pre-commit when
+            # running `$ pre-commit run --all-files`.
             configPath =
               mkOption {
-                type = types.str;
-                description = lib.mdDoc "Path to a custom config file.";
-                default = "";
-                example = ".typos.toml";
+                type = types.nullOr (types.either types.str types.path);
+                description = lib.mdDoc "Path to a typos config file (recommended) or a string (deprecated).";
+                default = null;
+                example = "./.typos.toml";
               };
 
             diff =
@@ -3300,6 +3304,45 @@ lib.escapeShellArgs (lib.concatMap (ext: [ "--ghc-opt" "-X${ext}" ]) hooks.ormol
           entry = "${hooks.treefmt.package}/bin/treefmt --fail-on-change";
         };
       typos =
+        let
+          # Path to config file. May be in Nix store but can also be a relative
+          # path to a system-dependent file.
+          #
+          # After various upstream discussions [0]), the best solution is to
+          # provide the config file as Nix path but keep the string passing
+          # as fall-back.
+          #
+          # [0]: https://github.com/cachix/pre-commit-hooks.nix/pull/387#issuecomment-1893600631
+          pathToConfigFile =
+            if hooks.typos.settings.configPath != null
+            # Important: If passed as typeOf == "path", this is in Nix store
+            # which we in fact encourage.
+            then hooks.typos.settings.configPath
+            else
+              builtins.toFile "config.toml"
+                # Concatenate config in config file with section for ignoring words
+                # generated from list of words to ignore
+                ("${hooks.typos.settings.configuration}" +
+                  lib.strings.optionalString (hooks.typos.settings.ignored-words != [ ]) "\n\[default.extend-words\]" +
+                  lib.strings.concatMapStrings (x: "\n${x} = \"${x}\"") hooks.typos.settings.ignored-words
+                )
+          ;
+          # If the config file path is passed as Nix string and not as Nix
+          # Path, we can't read it from Nix, unfortunately.
+          excludesFromConfig =
+            if builtins.typeOf hooks.typos.settings.configPath == "path" # passed directly or as Path
+            then
+              (
+                let
+                  toml = builtins.fromTOML (builtins.readFile pathToConfigFile);
+                in
+                # The "files.extend-exclude" key comes from
+                  # https://github.com/crate-ci/typos/blob/master/docs/reference.md
+                  (toml.files or { }).extend-exclude or [ ]
+              )
+            else
+              [ ];
+        in
         {
           name = "typos";
           description = "Source code spell checker";
@@ -3314,8 +3357,8 @@ lib.escapeShellArgs (lib.concatMap (ext: [ "--ghc-opt" "-X${ext}" ]) hooks.ormol
                   (with hooks.typos.settings; [
                     [ binary "--binary" ]
                     [ (color != "auto") "--color ${color}" ]
-                    [ (configuration != "") "--config ${configFile}" ]
-                    [ (configPath != "" && configuration == "") "--config ${configPath}" ]
+                    # Config file always exists (we generate one if not).
+                    [ true "--config ${pathToConfigFile}" ]
                     [ diff "--diff" ]
                     [ (exclude != "") "--exclude ${exclude} --force-exclude" ]
                     [ (format != "long") "--format ${format}" ]
@@ -3331,6 +3374,7 @@ lib.escapeShellArgs (lib.concatMap (ext: [ "--ghc-opt" "-X${ext}" ]) hooks.ormol
             in
             "${hooks.typos.package}/bin/typos ${cmdArgs}";
           types = [ "text" ];
+          excludes = excludesFromConfig;
         };
       typstfmt = {
         name = "typstfmt";