diff --git a/CoverageProfiler/CoverageProfiler.wdl b/CoverageProfiler/CoverageProfiler.wdl index 67e816a..03b1f5e 100644 --- a/CoverageProfiler/CoverageProfiler.wdl +++ b/CoverageProfiler/CoverageProfiler.wdl @@ -149,6 +149,7 @@ workflow coverageProfile { Int minMappingQuality Int? mem_gb Int? cpu + Int? disk_size_gb String samtools_docker = "euformatics/samtools:1.20" } command <<< @@ -175,7 +176,7 @@ workflow coverageProfile { memory: select_first([mem_gb, 7]) * 1000 + " MB" cpu: select_first([cpu, 1]) docker: samtools_docker - disks: "local-disk 500 SSD" + disks: "local-disk ~{disk_size_gb} SSD" preemptible: 0 maxRetries: 3 }