Skip to content
Build and Test QUICK Serial Version

Add name to CUDA workflow #75

Sign in to view logs

Add name to CUDA workflow

Add name to CUDA workflow #75

Workflow file for this run

.github/workflows/build_test_serial.yml at 48172c5
name: 'Build and Test QUICK Serial Version'
defaults:
run:
shell: bash
on:
push:
paths-ignore:
- '**.md'
pull_request:
paths-ignore:
- '**.md'
jobs:
build-and-test-serial-legacy-configure-make:
strategy:
fail-fast: false
matrix:
include:
- os: 'ubuntu-22.04'
compiler-type: 'gnu'
compiler-version: '10'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-10 g++-10 gfortran-10'
hdf5-install: 'libhdf5-dev'
hdf5-restart-support: TRUE
- os: 'ubuntu-22.04'
compiler-type: 'gnu'
compiler-version: '11'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-11 g++-11 gfortran-11'
hdf5-install: 'libhdf5-dev'
hdf5-restart-support: TRUE
- os: 'ubuntu-24.04'
compiler-type: 'gnu'
compiler-version: '12'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-12 g++-12 gfortran-12'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04'
compiler-type: 'gnu'
compiler-version: '13'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-13 g++-13 gfortran-13'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04'
compiler-type: 'gnu'
compiler-version: '14'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-14 g++-14 gfortran-14'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04-arm'
compiler-type: 'gnu'
compiler-version: '14'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-14 g++-14 gfortran-14'
hdf5-install: ''
hdf5-restart-support: FALSE
runs-on: ${{ matrix.os }}
name: ${{ matrix.os }} - Serial - Legacy - ${{ matrix.compiler-type }} - ${{ matrix.compiler-version }}
steps:
- name: 'Checkout Repository'
uses: actions/checkout@v4
- name: 'Install Dependencies for Serial Version'
run: |
if [ "$RUNNER_OS" == "Linux" ]; then
sudo rm -rf /usr/share/dotnet
sudo rm -rf /opt/ghc
sudo rm -rf /usr/local/.ghcup
snap list --all | awk '/disabled/{print $1, $3}' | \
while read snapname revision; do
sudo snap remove "$snapname" --revision="$revision"
done
sudo apt-get remove -y 'php.*' '^mysql-.*' azure-cli \
google-chrome-stable firefox powershell mono-devel \
libgl1-mesa-dri google-cloud-sdk google-cloud-cli || true
sudo apt-get autoremove -y
sudo apt-get update
sudo apt-get upgrade
sudo apt-get install -y ${{ matrix.compiler-install }} parallel ${{ matrix.hdf5-install }}
if [[ ${{ matrix.compiler-type }} == 'gnu' || ${{ matrix.compiler-type }} == 'clang' ]]; then
sudo rm /usr/bin/${{ matrix.c-compiler }}
sudo ln -s -T ${{ matrix.c-compiler }}-${{ matrix.compiler-version }} /usr/bin/${{ matrix.c-compiler }}
sudo rm /usr/bin/${{ matrix.cxx-compiler }}
sudo ln -s -T ${{ matrix.cxx-compiler }}-${{ matrix.compiler-version }} /usr/bin/${{ matrix.cxx-compiler }}
if [[ ${{ matrix.compiler-type }} == 'gnu' ]]; then
sudo rm /usr/bin/${{ matrix.fortran-compiler }}
sudo ln -s -T ${{ matrix.fortran-compiler }}-${{ matrix.compiler-version }} /usr/bin/${{ matrix.fortran-compiler }}
fi
fi
sudo apt-get clean
fi
- name: 'Log Softare Environment Configuration'
run: |
if [ "$RUNNER_OS" == "Linux" ]; then
echo "OS version:"
cat /etc/os-release
echo
echo "Kernel version:"
uname -a
echo
ldd --version
echo
echo "Fortran compiler version:"
${{ matrix.fortran-compiler }} --version
echo
echo "GNU Parallel version:"
parallel --version
fi
- name: 'Setup Environment Variables for Building and Running Tests'
run: |
echo "QUICK_BASIS=$PWD/install/basis" >> "$GITHUB_ENV"
echo "PATH=$PWD/install/bin:$PATH" >> "$GITHUB_ENV"
echo "LIBRARY_PATH=$PWD/install/lib/serial:/usr/lib/`uname -m`-linux-gnu/hdf5/serial:$LIBRARY_PATH" >> "$GITHUB_ENV"
echo "LD_LIBRARY_PATH=$PWD/install/lib/serial:/usr/lib/`uname -m`-linux-gnu/hdf5/serial:$LD_LIBRARY_PATH" >> "$GITHUB_ENV"
echo "PARALLEL_TEST_COUNT=2" >> "$GITHUB_ENV"
echo "CC=${{ matrix.c-compiler }}" >> "$GITHUB_ENV"
echo "CXX=${{ matrix.cxx-compiler }}" >> "$GITHUB_ENV"
echo "FC=${{ matrix.fortran-compiler }}" >> "$GITHUB_ENV"
if [ ${{ matrix.hdf5-restart-support }} == TRUE ]; then
echo "HDF5_FORTRAN_MOD_DIR=/usr/include/hdf5/serial" >> "$GITHUB_ENV"
fi
- name: 'Configure Serial Version'
run: |
if [ ${{ matrix.hdf5-restart-support }} == TRUE ]; then
./configure --serial --hdf5 --enablef --shared --verbose --prefix $PWD/install \
${{ matrix.compiler-type }}
else
./configure --serial --enablef --shared --verbose --prefix $PWD/install \
${{ matrix.compiler-type }}
fi
- name: 'Build and Install Serial Version Using 2 Jobs'
run: |
make -j2 all install
- name: 'Run Tests for Serial Version (Make)'
run: |
make fulltest
- name: 'Upload Test Artifacts for Serial Version'
if: always()
uses: actions/upload-artifact@v4
with:
name: serial-legacy-configure-make-tests-${{ matrix.os }}-${{ matrix.compiler-type }}-${{ matrix.compiler-version }}
path: |
${{ github.workspace }}/install/runtest.log
${{ github.workspace }}/install/runtest-verbose.log
${{ github.workspace }}/install/test/runs/serial
retention-days: 3
compression-level: 6
- name: 'Download Test Artifacts for Serial Version'
uses: actions/download-artifact@v4
with:
name: serial-legacy-configure-make-tests-${{ matrix.os }}-${{ matrix.compiler-type }}-${{ matrix.compiler-version }}
- name: 'Display Artifacts'
run: |
ls -R
build-and-test-serial-cmake:
strategy:
fail-fast: false
matrix:
include:
- os: 'ubuntu-22.04'
compiler-type: 'GNU'
compiler-version: '10'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-10 g++-10 gfortran-10'
hdf5-install: 'libhdf5-dev'
hdf5-restart-support: TRUE
- os: 'ubuntu-22.04'
compiler-type: 'GNU'
compiler-version: '11'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-11 g++-11 gfortran-11'
hdf5-install: 'libhdf5-dev'
hdf5-restart-support: TRUE
- os: 'ubuntu-24.04'
compiler-type: 'GNU'
compiler-version: '12'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-12 g++-12 gfortran-12'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04'
compiler-type: 'GNU'
compiler-version: '13'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-13 g++-13 gfortran-13'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04'
compiler-type: 'GNU'
compiler-version: '14'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-14 g++-14 gfortran-14'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04'
compiler-type: 'CLANG'
compiler-version: '17'
c-compiler: 'clang'
cxx-compiler: 'clang++'
fortran-compiler: 'gfortran'
compiler-install: 'clang-17 gfortran'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04'
compiler-type: 'CLANG'
compiler-version: '18'
c-compiler: 'clang'
cxx-compiler: 'clang++'
fortran-compiler: 'gfortran'
compiler-install: 'clang-18 gfortran'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04'
compiler-type: 'LLVM'
compiler-version: '20'
c-compiler: 'clang'
cxx-compiler: 'clang++'
fortran-compiler: 'flang'
compiler-install: 'clang-20 flang-20'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04'
compiler-type: 'INTELLLVM'
compiler-version: '2024.2.1'
c-compiler: 'icx'
cxx-compiler: 'icpx'
fortran-compiler: 'ifx'
compiler-install: 'intel-oneapi-compiler-dpcpp-cpp-2024.2 intel-oneapi-compiler-fortran-2024.2 intel-oneapi-mkl-2024.2 intel-oneapi-mkl-devel-2024.2'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04'
compiler-type: 'INTELLLVM'
compiler-version: '2025.0.1'
c-compiler: 'icx'
cxx-compiler: 'icpx'
fortran-compiler: 'ifx'
compiler-install: 'intel-oneapi-compiler-dpcpp-cpp-2025.0 intel-oneapi-compiler-fortran-2025.0 intel-oneapi-mkl-2025.0 intel-oneapi-mkl-devel-2025.0'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04'
compiler-type: 'PGI'
compiler-version: '25.1'
c-compiler: 'pgcc'
cxx-compiler: 'pgcc++'
fortran-compiler: 'pgf90'
compiler-install: 'nvhpc-25-1 gfortran'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04-arm'
compiler-type: 'GNU'
compiler-version: '14'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc-14 g++-14 gfortran-14'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'ubuntu-24.04-arm'
compiler-type: 'CLANG'
compiler-version: '18'
c-compiler: 'clang'
cxx-compiler: 'clang++'
fortran-compiler: 'gfortran'
compiler-install: 'clang-18 gfortran'
hdf5-install: ''
hdf5-restart-support: FALSE
- os: 'macos-14'
compiler-type: 'GNU'
compiler-version: '15'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc@15'
hdf5-install: 'hdf5'
hdf5-restart-support: TRUE
- os: 'macos-14'
compiler-type: 'CLANG'
compiler-version: '20'
fortran-compiler-version: '15'
c-compiler: 'clang'
cxx-compiler: 'clang++'
fortran-compiler: 'gfortran'
compiler-install: 'llvm@20 gcc@15'
hdf5-install: 'hdf5'
hdf5-restart-support: TRUE
- os: 'macos-15'
compiler-type: 'GNU'
compiler-version: '15'
c-compiler: 'gcc'
cxx-compiler: 'g++'
fortran-compiler: 'gfortran'
compiler-install: 'gcc@15'
hdf5-install: 'hdf5'
hdf5-restart-support: TRUE
- os: 'macos-15'
compiler-type: 'CLANG'
compiler-version: '20'
fortran-compiler-version: '15'
c-compiler: 'clang'
cxx-compiler: 'clang++'
fortran-compiler: 'gfortran'
compiler-install: 'llvm@20 gcc@15'
hdf5-install: 'hdf5'
hdf5-restart-support: TRUE
runs-on: ${{ matrix.os }}
name: ${{ matrix.os }} - Serial - CMake - ${{ matrix.compiler-type }} - ${{ matrix.compiler-version }}
steps:
- name: 'Checkout Repository'
uses: actions/checkout@v4
- name: 'Setup Environment Variables for Building and Running Tests'
run: |
echo "QUICK_BASIS=$PWD/install/basis" >> "$GITHUB_ENV"
if [ "$RUNNER_OS" == "Linux" ]; then
if [ ${{ matrix.compiler-type }} == 'PGI' ]; then
echo "PATH=$PWD/install/bin:/opt/nvidia/hpc_sdk/`uname -s`_`uname -m`/${{ matrix.compiler-version }}/compilers/bin:$PATH" >> "$GITHUB_ENV"
echo "INCLUDE_PATH=/opt/nvidia/hpc_sdk/`uname -s`_`uname -m`/${{ matrix.compiler-version }}/compilers/include:$INCLUDE_PATH" >> "$GITHUB_ENV"
echo "LIBRARY_PATH=$PWD/install/lib:/opt/nvidia/hpc_sdk/`uname -s`_`uname -m`/${{ matrix.compiler-version }}/compilers/lib:$LIBRARY_PATH" >> "$GITHUB_ENV"
echo "LD_LIBRARY_PATH=$PWD/install/lib:/opt/nvidia/hpc_sdk/`uname -s`_`uname -m`/${{ matrix.compiler-version }}/compilers/lib:$LD_LIBRARY_PATH" >> "$GITHUB_ENV"
echo "CMAKE_PREFIX_PATH=/opt/nvidia/hpc_sdk/`uname -s`_`uname -m`/${{ matrix.compiler-version }}/compilers/:$CMAKE_PREFIX_PATH" >> "$GITHUB_ENV"
echo "NVHPC=/opt/nvidia/hpc_sdk" >> "$GITHUB_ENV"
echo "NVHPC_ROOT=/opt/nvidia/hpc_sdk/`uname -s`_`uname -m`/${{ matrix.compiler-version }}" >> "$GITHUB_ENV"
else
echo "PATH=$PWD/install/bin:$PATH" >> "$GITHUB_ENV"
echo "LIBRARY_PATH=$PWD/install/lib:$LIBRARY_PATH" >> "$GITHUB_ENV"
echo "LD_LIBRARY_PATH=$PWD/install/lib:$LD_LIBRARY_PATH" >> "$GITHUB_ENV"
fi
fi
echo "PARALLEL_TEST_COUNT=2" >> "$GITHUB_ENV"
echo "CC=${{ matrix.c-compiler }}" >> "$GITHUB_ENV"
echo "CXX=${{ matrix.cxx-compiler }}" >> "$GITHUB_ENV"
echo "FC=${{ matrix.fortran-compiler }}" >> "$GITHUB_ENV"
if [ "$RUNNER_OS" == "macOS" ]; then
echo "BREW_COMPILER_PREFIX=$(brew --prefix)/bin" >> "$GITHUB_ENV"
if [[ ${{ matrix.compiler-type }} == 'GNU' ]]; then
echo "PATH=$(brew --prefix)/bin:$PATH" >> "$GITHUB_ENV"
elif [[ ${{ matrix.compiler-type }} == 'CLANG' ]]; then
echo "PATH=$(brew --prefix)/bin:$(brew --prefix)/opt/llvm@${{ matrix.compiler-version }}/bin:$PATH" >> "$GITHUB_ENV"
fi
fi
- name: 'Install Dependencies for Serial Version'
run: |
if [ "$RUNNER_OS" == "Linux" ]; then
sudo rm -rf /usr/share/dotnet
sudo rm -rf /opt/ghc
sudo rm -rf /usr/local/.ghcup
snap list --all | awk '/disabled/{print $1, $3}' | \
while read snapname revision; do
sudo snap remove "$snapname" --revision="$revision"
done
sudo apt-get remove -y 'php.*' '^mysql-.*' azure-cli \
google-chrome-stable firefox powershell mono-devel \
libgl1-mesa-dri google-cloud-sdk google-cloud-cli || true
sudo apt-get autoremove -y
sudo apt-get update
sudo apt-get upgrade
if [ ${{ matrix.compiler-type }} == 'INTELLLVM' ]; then
sudo apt-get install -y gpg-agent wget
wget -O- https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB \
| gpg --dearmor | sudo tee /usr/share/keyrings/oneapi-archive-keyring.gpg > /dev/null
echo "deb [signed-by=/usr/share/keyrings/oneapi-archive-keyring.gpg] https://apt.repos.intel.com/oneapi all main" \
| sudo tee /etc/apt/sources.list.d/oneAPI.list
sudo apt-get update
elif [ ${{ matrix.compiler-type }} == 'PGI' ]; then
sudo apt-get install -y gpg-agent wget
wget -O- https://developer.download.nvidia.com/hpc-sdk/ubuntu/DEB-GPG-KEY-NVIDIA-HPC-SDK \
| gpg --dearmor | sudo tee /usr/share/keyrings/nvidia-hpcsdk-archive-keyring.gpg > /dev/null
echo "deb [signed-by=/usr/share/keyrings/nvidia-hpcsdk-archive-keyring.gpg] https://developer.download.nvidia.com/hpc-sdk/ubuntu/amd64 /" \
| sudo tee /etc/apt/sources.list.d/nvhpc.list
sudo apt-get update
fi
sudo apt-get install -y ${{ matrix.compiler-install }} cmake parallel ${{ matrix.hdf5-install }}
if [[ ${{ matrix.compiler-type }} == 'GNU' || ${{ matrix.compiler-type }} == 'CLANG' || ${{ matrix.compiler-type }} == 'LLVM' ]]; then
sudo rm /usr/bin/${{ matrix.c-compiler }}
sudo ln -s -T ${{ matrix.c-compiler }}-${{ matrix.compiler-version }} /usr/bin/${{ matrix.c-compiler }}
sudo rm /usr/bin/${{ matrix.cxx-compiler }}
sudo ln -s -T ${{ matrix.cxx-compiler }}-${{ matrix.compiler-version }} /usr/bin/${{ matrix.cxx-compiler }}
if [[ ${{ matrix.compiler-type }} == 'GNU' ]]; then
sudo rm /usr/bin/${{ matrix.fortran-compiler }}
sudo ln -s -T ${{ matrix.fortran-compiler }}-${{ matrix.compiler-version }} /usr/bin/${{ matrix.fortran-compiler }}
elif [[ ${{ matrix.compiler-type }} == 'LLVM' ]]; then
sudo ln -s -T ${{ matrix.fortran-compiler }}-${{ matrix.compiler-version }} /usr/bin/${{ matrix.fortran-compiler }}
fi
fi
sudo apt-get clean
elif [ "$RUNNER_OS" == "macOS" ]; then
brew install --formula --quiet ${{ matrix.compiler-install }} parallel ${{ matrix.hdf5-install }}
if [[ ${{ matrix.compiler-type }} == 'GNU' || ${{ matrix.compiler-type }} == 'CLANG' ]]; then
if [[ ${{ matrix.compiler-type }} == 'GNU' ]]; then
sudo ln -Fs $BREW_COMPILER_PREFIX/${{ matrix.c-compiler }}-${{ matrix.compiler-version }} \
$BREW_COMPILER_PREFIX/${{ matrix.c-compiler }}
sudo ln -Fs $BREW_COMPILER_PREFIX/${{ matrix.cxx-compiler }}-${{ matrix.compiler-version }} \
$BREW_COMPILER_PREFIX/${{ matrix.cxx-compiler }}
sudo ln -Fs $BREW_COMPILER_PREFIX/${{ matrix.fortran-compiler }}-${{ matrix.compiler-version }} \
$BREW_COMPILER_PREFIX/${{ matrix.fortran-compiler }}
elif [[ ${{ matrix.compiler-type }} == 'CLANG' ]]; then
sudo ln -Fs $BREW_COMPILER_PREFIX/${{ matrix.fortran-compiler }}-${{ matrix.fortran-compiler-version }} \
$BREW_COMPILER_PREFIX/${{ matrix.fortran-compiler }}
fi
fi
fi
- name: 'Log Software Environment Configuration'
run: |
if [ "$RUNNER_OS" == "Linux" ]; then
if [ ${{ matrix.compiler-type }} == 'INTELLLVM' ]; then
source /opt/intel/oneapi/setvars.sh
fi
echo "OS version:"
cat /etc/os-release
echo
echo "Kernel version:"
uname -a
echo
ldd --version
echo
echo "Fortran compiler version:"
${{ matrix.fortran-compiler }} --version
echo
if [ ${{ matrix.compiler-type }} == 'INTELLLVM' ]; then
echo "MKL install directory:"
echo "${MKLROOT}"
echo
fi
echo "CMake version:"
cmake --version
echo
echo "GNU Parallel version:"
parallel --version
elif [ "$RUNNER_OS" == "macOS" ]; then
echo "OS version:"
cat /System/Library/CoreServices/SystemVersion.plist
echo
echo "Kernel version:"
uname -a
echo
echo "Fortran compiler version:"
${{ matrix.fortran-compiler }} --version
echo
echo "CMake version:"
cmake --version
echo
echo "GNU Parallel version:"
parallel --version
fi
- name: 'Configure Serial Version'
run: |
mkdir build
cd build
if [ ${{ matrix.compiler-type }} == 'INTELLLVM' ]; then
source /opt/intel/oneapi/setvars.sh
cmake .. -DCOMPILER=${{ matrix.compiler-type }} \
-DENABLEF=TRUE -DHDF5=${{ matrix.hdf5-restart-support }} \
-DCMAKE_INSTALL_PREFIX=$PWD/../install \
-DMKL_HOME=$MKLROOT -DMKL_MULTI_THREADED=FALSE -DTRUST_SYSTEM_LIBS=TRUE
else
cmake .. -DCOMPILER=${{ matrix.compiler-type }} \
-DENABLEF=TRUE -DHDF5=${{ matrix.hdf5-restart-support }} \
-DCMAKE_INSTALL_PREFIX=$PWD/../install
fi
- name: 'Build and Install Serial Version Using 2 Jobs'
run: |
if [ ${{ matrix.compiler-type }} == 'INTELLLVM' ]; then
source /opt/intel/oneapi/setvars.sh
fi
cd build
cmake --build . --parallel 2 --verbose
cmake --install .
- name: 'Run Tests for Serial Version'
run: |
if [ ${{ matrix.compiler-type }} == 'INTELLLVM' ]; then
source /opt/intel/oneapi/setvars.sh
fi
cd install
./runtest --serial --full
- name: 'Upload Test Artifacts for Serial Version'
if: always()
uses: actions/upload-artifact@v4
with:
name: serial-cmake-tests-${{ matrix.os }}-${{ matrix.compiler-type }}-${{ matrix.compiler-version }}
path: |
${{ github.workspace }}/install/runtest.log
${{ github.workspace }}/install/runtest-verbose.log
${{ github.workspace }}/install/test/runs/serial
retention-days: 3
compression-level: 6
- name: 'Download Test Artifacts for Serial Version'
uses: actions/download-artifact@v4
with:
name: serial-cmake-tests-${{ matrix.os }}-${{ matrix.compiler-type }}-${{ matrix.compiler-version }}
- name: 'Display Artifacts'
run: |
ls -R