Automated output PDFs are providing very large y-axis limits for mutation rate (16%). I assume this is some maximum value and driven by a few extreme outliers in my sample. However, such a large y-axis only helps highlight the outliers and is not very informative about the rest of the data.
Shapemapper2 output plot:
Same plot generated in RNAvigate with a default y-axis (4%) for comparison:
Automated output PDFs are providing very large y-axis limits for mutation rate (16%). I assume this is some maximum value and driven by a few extreme outliers in my sample. However, such a large y-axis only helps highlight the outliers and is not very informative about the rest of the data.
Shapemapper2 output plot:
Same plot generated in RNAvigate with a default y-axis (4%) for comparison:
