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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -48,7 +48,7 @@ fpocketR is an RNA-specific wrapper for [fpocket 4.0](https://github.com/Discngi
4848
49492 . ** Create and activate a new environment with fpocket and Python 3.11**
5050 ``` bash
51- conda create -n fpocketR -c conda-forge fpocket=4.0.3 python=3.11
51+ conda create -n fpocketR -c conda-forge fpocket=4.0.3 python=3.11 pymol-open-source=2.5
5252 conda activate fpocketR
5353 ```
5454
Original file line number Diff line number Diff line change @@ -21,16 +21,15 @@ classifiers = [
2121requires-python = " ==3.11.*"
2222# Runtime dependencies (see devtools/conda-envs/test_env.yaml)
2323dependencies = [
24- " pymol-open-source==2.5.0" ,
2524 " prody==2.3.0" ,
2625 " pandas" ,
2726 " rdkit==2023.9.6" ,
2827 " seaborn" ,
2928 " trimesh==4.2.0" ,
3029 " scipy==1.12.0" ,
3130 " biopython==1.83" ,
32- ]
33- # NOTE: fpocket must be installed separately via conda-forge (not available on PyPI)
31+
32+ # NOTE: fpocket and pymol must be installed separately via conda-forge (not available on PyPI)
3433
3534# Update the urls once the hosting is set up.
3635# [project.urls]
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