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environment.yml
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name: kraken
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=0_gnu
- blast=2.5.0=hc0b0e79_3
- boost=1.73.0=py37h429e714_0
- boost-cpp=1.73.0=h7b93d67_1
- bracken=2.6.0=py37h99015e2_1
- bzip2=1.0.8=h516909a_2
- ca-certificates=2020.4.5.2=hecda079_0
- cairo=1.16.0=h3fc0475_1004
- certifi=2020.4.5.2=py37hc8dfbb8_0
- expat=2.2.9=he1b5a44_2
- fontconfig=2.13.1=h1056068_1002
- freetype=2.10.2=he06d7ca_0
- fribidi=1.0.9=h516909a_0
- gettext=0.19.8.1=hc5be6a0_1002
- glib=2.64.3=h6f030ca_0
- graphite2=1.3.13=he1b5a44_1001
- graphviz=2.42.3=h0511662_0
- harfbuzz=2.4.0=hee91db6_5
- icu=67.1=he1b5a44_0
- jpeg=9d=h516909a_0
- kraken2=2.0.9beta=pl526hc9558a2_0
- ld_impl_linux-64=2.34=h53a641e_5
- libblas=3.8.0=14_openblas
- libcblas=3.8.0=14_openblas
- libffi=3.2.1=he1b5a44_1007
- libgcc-ng=9.2.0=h24d8f2e_2
- libgfortran-ng=7.5.0=hdf63c60_6
- libgomp=9.2.0=h24d8f2e_2
- libiconv=1.15=h516909a_1006
- libidn2=2.3.0=h516909a_0
- liblapack=3.8.0=14_openblas
- libopenblas=0.3.7=h5ec1e0e_6
- libpng=1.6.37=hed695b0_1
- libstdcxx-ng=9.2.0=hdf63c60_2
- libtiff=4.1.0=hc7e4089_6
- libtool=2.4.6=h14c3975_1002
- libunistring=0.9.10=h14c3975_0
- libuuid=2.32.1=h14c3975_1000
- libwebp-base=1.1.0=h516909a_3
- libxcb=1.13=h14c3975_1002
- libxml2=2.9.10=h72b56ed_1
- lz4-c=1.9.2=he1b5a44_1
- ncurses=6.1=hf484d3e_1002
- numpy=1.18.5=py37h8960a57_0
- openssl=1.1.1g=h516909a_0
- pango=1.42.4=h7062337_4
- pcre=8.44=he1b5a44_0
- perl=5.26.2=h516909a_1006
- pip=20.1.1=py_1
- pixman=0.38.0=h516909a_1003
- popt=1.16=h299ea2f_2002
- pthread-stubs=0.4=h14c3975_1001
- python=3.7.6=cpython_h8356626_6
- python_abi=3.7=1_cp37m
- readline=8.0=hf8c457e_0
- rsync=3.1.3=hed695b0_1002
- setuptools=47.3.1=py37hc8dfbb8_0
- sqlite=3.30.1=hcee41ef_0
- tar=1.32=hd4ba37b_0
- tk=8.6.10=hed695b0_0
- wget=1.20.1=h22169c7_0
- wheel=0.34.2=py_1
- xorg-kbproto=1.0.7=h14c3975_1002
- xorg-libice=1.0.10=h516909a_0
- xorg-libsm=1.2.3=h84519dc_1000
- xorg-libx11=1.6.9=h516909a_0
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xorg-libxext=1.3.4=h516909a_0
- xorg-libxpm=3.5.13=h516909a_0
- xorg-libxrender=0.9.10=h516909a_1002
- xorg-libxt=1.1.5=h516909a_1003
- xorg-renderproto=0.11.1=h14c3975_1002
- xorg-xextproto=7.3.0=h14c3975_1002
- xorg-xproto=7.0.31=h14c3975_1007
- xz=5.2.5=h516909a_0
- zlib=1.2.11=h516909a_1006
- zstd=1.4.4=h6597ccf_3
prefix: /home/moritz/miniconda3/envs/kraken