fix the Manifest (for real)

Author: penelopeysm

Manifest.toml

@@ -2,7 +2,7 @@
 
 julia_version = "1.11.6"
 manifest_format = "2.0"
-project_hash = "296b7e06e398e8898b40f44ed92b4d60c484484c"
+project_hash = "2db94c909342da49eb3ff313436b75e25977ace6"
 
 [[deps.ADTypes]]
 git-tree-sha1 = "60665b326b75db6517939d0e1875850bc4a54368"
@@ -685,9 +685,9 @@ version = "0.1.2"
 
 [[deps.DelayDiffEq]]
 deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "FastBroadcast", "ForwardDiff", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "OrdinaryDiffEqCore", "OrdinaryDiffEqDefault", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqFunctionMap", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqRosenbrock", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SimpleUnPack", "SymbolicIndexingInterface"]
-git-tree-sha1 = "d9b1e66070ce15bc2b9c3d5af6b94f693fc03ba4"
+git-tree-sha1 = "c50981fb5b6441a1213debb1423385a462e88032"
 uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb"
-version = "5.58.0"
+version = "5.56.0"
 
 [[deps.DelimitedFiles]]
 deps = ["Mmap"]
@@ -1180,9 +1180,9 @@ version = "1.3.7"
 
 [[deps.ForwardDiff]]
 deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"]
-git-tree-sha1 = "a2df1b776752e3f344e5116c06d75a10436ab853"
+git-tree-sha1 = "910febccb28d493032495b7009dce7d7f7aee554"
 uuid = "f6369f11-7733-5829-9624-2563aa707210"
-version = "0.10.38"
+version = "1.0.1"
 weakdeps = ["StaticArrays"]
 
     [deps.ForwardDiff.extensions]
@@ -1299,24 +1299,6 @@ git-tree-sha1 = "53bb909d1151e57e2484c3d1b53e19552b887fb2"
 uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe"
 version = "1.0.2"
 
-[[deps.HDF5]]
-deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"]
-git-tree-sha1 = "e856eef26cf5bf2b0f95f8f4fc37553c72c8641c"
-uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
-version = "0.17.2"
-
-    [deps.HDF5.extensions]
-    MPIExt = "MPI"
-
-    [deps.HDF5.weakdeps]
-    MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195"
-
-[[deps.HDF5_jll]]
-deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"]
-git-tree-sha1 = "e94f84da9af7ce9c6be049e9067e511e17ff89ec"
-uuid = "0234f1f7-429e-5d53-9886-15a909be8d59"
-version = "1.14.6+0"
-
 [[deps.HTTP]]
 deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "PrecompileTools", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"]
 git-tree-sha1 = "ed5e9c58612c4e081aecdb6e1a479e18462e041e"
@@ -1344,12 +1326,6 @@ weakdeps = ["Distributions"]
     [deps.HiddenMarkovModels.extensions]
     HiddenMarkovModelsDistributionsExt = "Distributions"
 
-[[deps.Hwloc_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "92f65c4d78ce8cdbb6b68daf88889950b0a99d11"
-uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8"
-version = "2.12.1+0"
-
 [[deps.HypergeometricFunctions]]
 deps = ["LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"]
 git-tree-sha1 = "68c173f4f449de5b438ee67ed0c9c748dc31a2ec"
@@ -1478,9 +1454,9 @@ version = "0.2.1"
 
 [[deps.JpegTurbo_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "eac1206917768cb54957c65a615460d87b455fc1"
+git-tree-sha1 = "e95866623950267c1e4878846f848d94810de475"
 uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8"
-version = "3.1.1+0"
+version = "3.1.2+0"
 
 [[deps.JuliaVariables]]
 deps = ["MLStyle", "NameResolution"]
@@ -1757,10 +1733,10 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 version = "1.11.0"
 
 [[deps.LinearSolve]]
-deps = ["ArrayInterface", "ChainRulesCore", "ConcreteStructs", "DocStringExtensions", "EnumX", "GPUArraysCore", "InteractiveUtils", "Krylov", "LazyArrays", "Libdl", "LinearAlgebra", "MKL_jll", "Markdown", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "StaticArraysCore", "UnPack"]
-git-tree-sha1 = "7d0e40cefc7f5f4920dc91e4d5f361ace40e1124"
+deps = ["ArrayInterface", "ChainRulesCore", "ConcreteStructs", "DocStringExtensions", "EnumX", "GPUArraysCore", "InteractiveUtils", "Krylov", "LazyArrays", "Libdl", "LinearAlgebra", "MKL_jll", "Markdown", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLLogging", "SciMLOperators", "Setfield", "StaticArraysCore", "UnPack"]
+git-tree-sha1 = "eaef503c581f5325d7202ebfd13298975e1269d6"
 uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
-version = "3.32.0"
+version = "3.33.0"
 
     [deps.LinearSolve.extensions]
     LinearSolveAMDGPUExt = "AMDGPU"
@@ -1969,10 +1945,10 @@ version = "1.10.2"
     cuDNN = "02a925ec-e4fe-4b08-9a7e-0d78e3d38ccd"
 
 [[deps.MCMCChains]]
-deps = ["AbstractMCMC", "AxisArrays", "Dates", "Distributions", "IteratorInterfaceExtensions", "KernelDensity", "LinearAlgebra", "MCMCDiagnosticTools", "MLJModelInterface", "NaturalSort", "OrderedCollections", "PrettyTables", "Random", "RecipesBase", "Statistics", "StatsBase", "StatsFuns", "TableTraits", "Tables"]
-git-tree-sha1 = "cd7aee22384792c726e19f2a22dc060b886edded"
+deps = ["AbstractMCMC", "AxisArrays", "DataAPI", "Dates", "Distributions", "IteratorInterfaceExtensions", "KernelDensity", "LinearAlgebra", "MCMCDiagnosticTools", "MLJModelInterface", "NaturalSort", "OrderedCollections", "PrettyTables", "Random", "RecipesBase", "Statistics", "StatsBase", "StatsFuns", "TableTraits", "Tables"]
+git-tree-sha1 = "f3993c723865f670102011ef22811e2bbb0ef1a8"
 uuid = "c7f686f2-ff18-58e9-bc7b-31028e88f75d"
-version = "6.0.7"
+version = "7.2.0"
 
 [[deps.MCMCDiagnosticTools]]
 deps = ["AbstractFFTs", "DataAPI", "DataStructures", "Distributions", "LinearAlgebra", "MLJModelInterface", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tables"]
@@ -2073,24 +2049,6 @@ git-tree-sha1 = "a772d8d1987433538a5c226f79393324b55f7846"
 uuid = "f1d291b0-491e-4a28-83b9-f70985020b54"
 version = "0.4.8"
 
-[[deps.MPICH_jll]]
-deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
-git-tree-sha1 = "d72d0ecc3f76998aac04e446547259b9ae4c265f"
-uuid = "7cb0a576-ebde-5e09-9194-50597f1243b4"
-version = "4.3.1+0"
-
-[[deps.MPIPreferences]]
-deps = ["Libdl", "Preferences"]
-git-tree-sha1 = "c105fe467859e7f6e9a852cb15cb4301126fac07"
-uuid = "3da0fdf6-3ccc-4f1b-acd9-58baa6c99267"
-version = "0.1.11"
-
-[[deps.MPItrampoline_jll]]
-deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
-git-tree-sha1 = "e214f2a20bdd64c04cd3e4ff62d3c9be7e969a59"
-uuid = "f1f71cc9-e9ae-5b93-9b94-4fe0e1ad3748"
-version = "5.5.4+0"
-
 [[deps.MacroTools]]
 git-tree-sha1 = "1e0228a030642014fe5cfe68c2c0a818f9e3f522"
 uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09"
@@ -2153,24 +2111,12 @@ git-tree-sha1 = "7dbf904fa6c4447bd1f1d316886bfbe29feacf45"
 uuid = "6fafb56a-5788-4b4e-91ca-c0cea6611c73"
 version = "0.2.2"
 
-[[deps.MicroCanonicalHMC]]
-deps = ["AbstractMCMC", "Adapt", "Distributions", "ForwardDiff", "HDF5", "LinearAlgebra", "LogDensityProblems", "LogDensityProblemsAD", "MCMCChains", "MCMCDiagnosticTools", "Markdown", "ProgressMeter", "Random", "Statistics"]
-git-tree-sha1 = "99fd367f8b8fc9d479420d33e8f16f3dab3162f4"
-uuid = "234d2aa0-2291-45f7-9047-6fa6f316b0a8"
-version = "0.1.6"
-
 [[deps.MicroCollections]]
 deps = ["Accessors", "BangBang", "InitialValues"]
 git-tree-sha1 = "44d32db644e84c75dab479f1bc15ee76a1a3618f"
 uuid = "128add7d-3638-4c79-886c-908ea0c25c34"
 version = "0.2.0"
 
-[[deps.MicrosoftMPI_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "bc95bf4149bf535c09602e3acdf950d9b4376227"
-uuid = "9237b28f-5490-5468-be7b-bb81f5f5e6cf"
-version = "10.1.4+3"
-
 [[deps.Missings]]
 deps = ["DataAPI"]
 git-tree-sha1 = "ec4f7fbeab05d7747bdf98eb74d130a2a2ed298d"
@@ -2446,12 +2392,6 @@ deps = ["Artifacts", "Libdl"]
 uuid = "05823500-19ac-5b8b-9628-191a04bc5112"
 version = "0.8.5+0"
 
-[[deps.OpenMPI_jll]]
-deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML", "Zlib_jll"]
-git-tree-sha1 = "ec764453819f802fc1e144bfe750c454181bd66d"
-uuid = "fe0851c0-eecd-5654-98d4-656369965a5c"
-version = "5.0.8+0"
-
 [[deps.OpenSSL]]
 deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"]
 git-tree-sha1 = "f1a7e086c677df53e064e0fdd2c9d0b0833e3f6e"
@@ -3130,6 +3070,11 @@ git-tree-sha1 = "b00814e67e8aacda2073865a3832e6cc378ea504"
 uuid = "26aad666-b158-4e64-9d35-0e672562fa48"
 version = "0.5.1"
 
+[[deps.SafeTestsets]]
+git-tree-sha1 = "81ec49d645af090901120a1542e67ecbbe044db3"
+uuid = "1bc83da4-3b8d-516f-aca4-4fe02f6d838f"
+version = "0.1.0"
+
 [[deps.SciMLBase]]
 deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Moshi", "PreallocationTools", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"]
 git-tree-sha1 = "4398bda451c3c7aaca91a8077bcba227fe236d72"
@@ -3163,6 +3108,12 @@ git-tree-sha1 = "3414071e3458f3065de7fa5aed55283b236b4907"
 uuid = "19f34311-ddf3-4b8b-af20-060888a46c0e"
 version = "0.1.8"
 
+[[deps.SciMLLogging]]
+deps = ["DocStringExtensions", "Logging", "LoggingExtras", "Moshi", "SafeTestsets"]
+git-tree-sha1 = "e8a13b37734bc601500cd29336f114f67c7fb353"
+uuid = "a6db7da4-7206-11f0-1eab-35f2a5dbe1d1"
+version = "1.0.0"
+
 [[deps.SciMLOperators]]
 deps = ["Accessors", "ArrayInterface", "DocStringExtensions", "LinearAlgebra", "MacroTools"]
 git-tree-sha1 = "aea915a39b547c48a18ee041120db1ae8df5a691"
@@ -3997,12 +3948,6 @@ git-tree-sha1 = "b6a34e0e0960190ac2a4363a1bd003504772d631"
 uuid = "214eeab7-80f7-51ab-84ad-2988db7cef09"
 version = "0.61.1+0"
 
-[[deps.libaec_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "f5733a5a9047722470b95a81e1b172383971105c"
-uuid = "477f73a3-ac25-53e9-8cc3-50b2fa2566f0"
-version = "1.1.3+0"
-
 [[deps.libaom_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
 git-tree-sha1 = "4bba74fa59ab0755167ad24f98800fe5d727175b"