PyTorch version with support for GPU

[tsuijenk]

Hello authors,

My understanding is that DECODE is built against pytorch 1.7.1. It does not work with the current version of pytorch 1.10. However, I need to be on version 1.10 to get support for my GPU.

Is there any way to get around this?

Thanks,
Jenkin

[Haydnspass]

Dear Jenkin,

Yes you are correct, we are also working on an upcoming release of decode with a more recent pytorch version.
I already tried that out recently, and I think it was only minor tests that were failing.

In the meantime I would advise to clone the repository, change the environment.yaml to your pytorch/cudatoolkit needs and follow the developer instructions described here:
https://github.com/TuragaLab/DECODE/blob/master/DEVELOPER.md

Let me know if that works for you