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To setup your environment for using the web application we recommend using conda as it can simplify things in comparison to other implementations of python environment handling.

Follow these steps:

  • Install a variant of conda. For this example we will use mambaforge (includes mamba, a faster conda implementation, and has conda-forge added as a default channel). It can be downloaded here: https://github.com/conda-forge/miniforge/releases
  • Create the conda environment:
    • mamba env create -f dev-environment.yml
  • Activate the environment
    • mamba activate cilviewer_webapp
  • Install the app in the environment from the CILViewer directory
    • pip install ./Wrappers/Python
  • Start the web application
    • web_cilviewer path/to/folder/of/data/to/use where path/to/folder/of/data/to/use is the folder storing the data i.e. no filename included
  • Pass the 2D arg to the script if you want to use the 2D viewer i.e. --2D or -d args. This needs to be added before the path
    • web_cilviewer --2D path/to/folder/of/data/to/use