Hi Til,
After upgrading boldigger3 with the new changes that Dominik made, I am struggling to open the apscale_gui. I spoke with Dominik and he suggested that it's an issue on your end. I get the following error:
ImportError: cannot import name 'metadata_download' from 'boldigger3' (C:\Users\natha.conda\envs\apscale4\Lib\site-packages\boldigger3_init_.py)
File "C:\Users\natha.conda\envs\apscale4\Lib\site-packages\apscale_gui\apscale_gui.py", line 50, in
from apscale_blast.main import organism_filter as organism_filter
File "C:\Users\natha.conda\envs\apscale4\Lib\site-packages\apscale_blast_main_.py", line 15, in
from boldigger3 import metadata_download
When I downloaded the bold databases, I stored it in my apscale_projects directory in a folder called "BOLDDIGGER_databases".
UPDATE: When I revert boldigger3 to version (pip install boldigger3==2.3.0), then apscale_gui works again
Hi Til,
After upgrading boldigger3 with the new changes that Dominik made, I am struggling to open the apscale_gui. I spoke with Dominik and he suggested that it's an issue on your end. I get the following error:
ImportError: cannot import name 'metadata_download' from 'boldigger3' (C:\Users\natha.conda\envs\apscale4\Lib\site-packages\boldigger3_init_.py)
File "C:\Users\natha.conda\envs\apscale4\Lib\site-packages\apscale_gui\apscale_gui.py", line 50, in
from apscale_blast.main import organism_filter as organism_filter
File "C:\Users\natha.conda\envs\apscale4\Lib\site-packages\apscale_blast_main_.py", line 15, in
from boldigger3 import metadata_download
When I downloaded the bold databases, I stored it in my apscale_projects directory in a folder called "BOLDDIGGER_databases".
UPDATE: When I revert boldigger3 to version (pip install boldigger3==2.3.0), then apscale_gui works again