Skip to content

APSCALE GUI failing to open after Boldigger3 fix #20

@HeeeyNathan

Description

@HeeeyNathan

Hi Til,

After upgrading boldigger3 with the new changes that Dominik made, I am struggling to open the apscale_gui. I spoke with Dominik and he suggested that it's an issue on your end. I get the following error:

ImportError: cannot import name 'metadata_download' from 'boldigger3' (C:\Users\natha.conda\envs\apscale4\Lib\site-packages\boldigger3_init_.py)

File "C:\Users\natha.conda\envs\apscale4\Lib\site-packages\apscale_gui\apscale_gui.py", line 50, in
from apscale_blast.main import organism_filter as organism_filter
File "C:\Users\natha.conda\envs\apscale4\Lib\site-packages\apscale_blast_main_.py", line 15, in
from boldigger3 import metadata_download

When I downloaded the bold databases, I stored it in my apscale_projects directory in a folder called "BOLDDIGGER_databases".

UPDATE: When I revert boldigger3 to version (pip install boldigger3==2.3.0), then apscale_gui works again

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions