From 0da7109e60494e48ee67f02dbaf8278c57197123 Mon Sep 17 00:00:00 2001 From: juaristi22 Date: Tue, 22 Jul 2025 11:39:20 +0200 Subject: [PATCH 1/4] set up makefile, .toml and test suite --- Makefile | 34 +++++++++++++ pyproject.toml | 50 ++++++++++++++++++++ src/policyengine_data/__init__.py | 1 + src/policyengine_data/multi_year_dataset.py | 1 + src/policyengine_data/single_year_dataset.py | 1 + tests/README.md | 18 +++++++ tests/__init__.py | 1 + tests/test_basic.py | 8 ++++ 8 files changed, 114 insertions(+) create mode 100644 Makefile create mode 100644 pyproject.toml create mode 100644 src/policyengine_data/__init__.py create mode 100644 src/policyengine_data/multi_year_dataset.py create mode 100644 src/policyengine_data/single_year_dataset.py create mode 100644 tests/README.md create mode 100644 tests/__init__.py create mode 100644 tests/test_basic.py diff --git a/Makefile b/Makefile new file mode 100644 index 0000000..40699d5 --- /dev/null +++ b/Makefile @@ -0,0 +1,34 @@ +test: + pytest tests/ --cov=policyengine_data --cov-report=xml --maxfail=0 -v + +install: + pip install -e ".[dev]" + +check-format: + linecheck . + isort --check-only --profile black src/ + black . -l 79 --check + +format: + linecheck . --fix + isort --profile black src/ + black . -l 79 + +documentation: + cd docs && jupyter-book build . + python docs/add_plotly_to_book.py docs/_build/html + +build: + pip install build + python -m build + +clean: + rm -rf dist/ build/ *.egg-info/ + rm -rf docs/_build/ + +changelog: + build-changelog changelog.yaml --output changelog.yaml --update-last-date --start-from 0.1.0 --append-file changelog_entry.yaml + build-changelog changelog.yaml --org PolicyEngine --repo policyengine_data --output CHANGELOG.md --template .github/changelog_template.md + bump-version changelog.yaml pyproject.toml + rm changelog_entry.yaml || true + touch changelog_entry.yaml diff --git a/pyproject.toml b/pyproject.toml new file mode 100644 index 0000000..fddc6c0 --- /dev/null +++ b/pyproject.toml @@ -0,0 +1,50 @@ +[project] +name = "policyengine-data" +version = "0.16.0" +description = "A package to create representative microdata for PolicyEngine's policy models." +readme = "README.md" +authors = [ + {name = "PolicyEngine", email = "hello@policyengine.org"}, +] +requires-python = ">=3.11" +dependencies = [ + "h5py", + "numpy", + "pandas", + "huggingface_hub", +] + +[project.optional-dependencies] +dev = [ + "pytest", + "pytest-cov", + "flake8", + "black", + "isort", + "mypy", + "build", + "linecheck", + "yaml-changelog>=0.1.7", +] + +[tool.setuptools] +packages = ["policyengine_data"] +include-package-data = true + +[tool.setuptools.package-data] +"policyengine_data" = ["**/*"] + +[tool.isort] +profile = "black" +line_length = 79 + +[tool.black] +line-length = 79 +target-version = ["py311"] + +[project.scripts] +policyengine-data = "policyengine_data:main" + +[build-system] +requires = ["hatchling"] +build-backend = "hatchling.build" diff --git a/src/policyengine_data/__init__.py b/src/policyengine_data/__init__.py new file mode 100644 index 0000000..8b13789 --- /dev/null +++ b/src/policyengine_data/__init__.py @@ -0,0 +1 @@ + diff --git a/src/policyengine_data/multi_year_dataset.py b/src/policyengine_data/multi_year_dataset.py new file mode 100644 index 0000000..8b13789 --- /dev/null +++ b/src/policyengine_data/multi_year_dataset.py @@ -0,0 +1 @@ + diff --git a/src/policyengine_data/single_year_dataset.py b/src/policyengine_data/single_year_dataset.py new file mode 100644 index 0000000..8b13789 --- /dev/null +++ b/src/policyengine_data/single_year_dataset.py @@ -0,0 +1 @@ + diff --git a/tests/README.md b/tests/README.md new file mode 100644 index 0000000..2d7a1f8 --- /dev/null +++ b/tests/README.md @@ -0,0 +1,18 @@ +# Policyengine-data tests + +This directory contains tests for the policyengine-data package. + +## Test structure + +The test suite is organized as follows: + +- **test_basic.py**: Basic functionality tests for the package +- Coming soon... + +## Running tests + +To run the tests, use the following command from the project root: + +```bash +make test +``` diff --git a/tests/__init__.py b/tests/__init__.py new file mode 100644 index 0000000..9291355 --- /dev/null +++ b/tests/__init__.py @@ -0,0 +1 @@ +"""Tests for the PolicyEngine-data package.""" diff --git a/tests/test_basic.py b/tests/test_basic.py new file mode 100644 index 0000000..c2f1d19 --- /dev/null +++ b/tests/test_basic.py @@ -0,0 +1,8 @@ +""" +Testing basic functionality of the policyengine-data package. +""" + + +def test_import() -> None: + """Test that the package can be imported.""" + import policyengine_data From 09fcf56389c5f6cc25328dc8703163736a0698b8 Mon Sep 17 00:00:00 2001 From: juaristi22 Date: Tue, 22 Jul 2025 11:47:05 +0200 Subject: [PATCH 2/4] add changelog --- .github/CONTRIBUTING.md | 7 + .github/changelog_template.md | 8 + .github/get-changelog-diff.sh | 2 + .github/has-functional-changes.sh | 12 + .github/is-version-number-acceptable.sh | 33 + .github/publish-git-tag.sh | 4 + CHANGELOG.md | 16 + changelog.yaml | 5 + changelog_entry.yaml | 6 + pyproject.toml | 2 +- uv.lock | 854 ++++++++++++++++++++++++ 11 files changed, 948 insertions(+), 1 deletion(-) create mode 100644 .github/CONTRIBUTING.md create mode 100644 .github/changelog_template.md create mode 100644 .github/get-changelog-diff.sh create mode 100644 .github/has-functional-changes.sh create mode 100644 .github/is-version-number-acceptable.sh create mode 100644 .github/publish-git-tag.sh create mode 100644 CHANGELOG.md create mode 100644 changelog.yaml create mode 100644 changelog_entry.yaml create mode 100644 uv.lock diff --git a/.github/CONTRIBUTING.md b/.github/CONTRIBUTING.md new file mode 100644 index 0000000..6569a07 --- /dev/null +++ b/.github/CONTRIBUTING.md @@ -0,0 +1,7 @@ +## Updating the code + +Please make sure that introduced changes are consistent with the testing api and add additional tests if relevant. + +## Updating the versioning + +Please add to `changelog.yaml` and then run `make changelog` before committing the results ONCE in this PR. \ No newline at end of file diff --git a/.github/changelog_template.md b/.github/changelog_template.md new file mode 100644 index 0000000..8a1e679 --- /dev/null +++ b/.github/changelog_template.md @@ -0,0 +1,8 @@ +# Changelog + +All notable changes to this project will be documented in this file. + +The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), +and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). + +{{changelog}} \ No newline at end of file diff --git a/.github/get-changelog-diff.sh b/.github/get-changelog-diff.sh new file mode 100644 index 0000000..66c2bfd --- /dev/null +++ b/.github/get-changelog-diff.sh @@ -0,0 +1,2 @@ +last_tagged_commit=`git describe --tags --abbrev=0 --first-parent` +git --no-pager diff $last_tagged_commit -- CHANGELOG.md \ No newline at end of file diff --git a/.github/has-functional-changes.sh b/.github/has-functional-changes.sh new file mode 100644 index 0000000..4c8a1d0 --- /dev/null +++ b/.github/has-functional-changes.sh @@ -0,0 +1,12 @@ +#! /usr/bin/env bash + +IGNORE_DIFF_ON="README.md CONTRIBUTING.md Makefile docs/* .gitignore LICENSE* .github/* data/*" + +last_tagged_commit=`git describe --tags --abbrev=0 --first-parent` # --first-parent ensures we don't follow tags not published in master through an unlikely intermediary merge commit + +if git diff-index --name-only --exit-code $last_tagged_commit -- . `echo " $IGNORE_DIFF_ON" | sed 's/ / :(exclude)/g'` # Check if any file that has not be listed in IGNORE_DIFF_ON has changed since the last tag was published. +then + echo "No functional changes detected." + exit 1 +else echo "The functional files above were changed." +fi \ No newline at end of file diff --git a/.github/is-version-number-acceptable.sh b/.github/is-version-number-acceptable.sh new file mode 100644 index 0000000..9a912ad --- /dev/null +++ b/.github/is-version-number-acceptable.sh @@ -0,0 +1,33 @@ +#! /usr/bin/env bash + +if [[ ${GITHUB_REF#refs/heads/} == master ]] +then + echo "No need for a version check on master." + exit 0 +fi + +if ! $(dirname "$BASH_SOURCE")/has-functional-changes.sh +then + echo "No need for a version update." + exit 0 +fi + +current_version=`python .github/fetch_version.py` + +if git rev-parse --verify --quiet $current_version +then + echo "Version $current_version already exists in commit:" + git --no-pager log -1 $current_version + echo + echo "Update the version number in setup.py before merging this branch into master." + echo "Look at the CONTRIBUTING.md file to learn how the version number should be updated." + exit 1 +fi + +if ! $(dirname "$BASH_SOURCE")/has-functional-changes.sh | grep --quiet CHANGELOG.md +then + echo "CHANGELOG.md has not been modified, while functional changes were made." + echo "Explain what you changed before merging this branch into master." + echo "Look at the CONTRIBUTING.md file to learn how to write the changelog." + exit 2 +fi \ No newline at end of file diff --git a/.github/publish-git-tag.sh b/.github/publish-git-tag.sh new file mode 100644 index 0000000..ce9ff58 --- /dev/null +++ b/.github/publish-git-tag.sh @@ -0,0 +1,4 @@ +#! /usr/bin/env bash + +git tag `python .github/fetch_version.py` # create a new tag +git push --tags || true # update the repository version \ No newline at end of file diff --git a/CHANGELOG.md b/CHANGELOG.md new file mode 100644 index 0000000..c5e0cd4 --- /dev/null +++ b/CHANGELOG.md @@ -0,0 +1,16 @@ +# Changelog + +All notable changes to this project will be documented in this file. + +The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), +and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). + +## [0.1.0] - 2025-07-22 00:00:00 + +### Added + +- Initialized project. + + + + diff --git a/changelog.yaml b/changelog.yaml new file mode 100644 index 0000000..f3e6e24 --- /dev/null +++ b/changelog.yaml @@ -0,0 +1,5 @@ +- changes: + added: + - Initialized project. + date: 2025-07-22 + version: 0.1.0 diff --git a/changelog_entry.yaml b/changelog_entry.yaml new file mode 100644 index 0000000..842a252 --- /dev/null +++ b/changelog_entry.yaml @@ -0,0 +1,6 @@ +- bump: minor + changes: + changed: + - Initialized changelogging. + - Added CI workflows and tests. + - Set up basic package structure and coverage. diff --git a/pyproject.toml b/pyproject.toml index fddc6c0..27cc66c 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [project] name = "policyengine-data" -version = "0.16.0" +version = "0.1.0" description = "A package to create representative microdata for PolicyEngine's policy models." readme = "README.md" authors = [ diff --git a/uv.lock b/uv.lock new file mode 100644 index 0000000..e154d54 --- /dev/null +++ b/uv.lock @@ -0,0 +1,854 @@ +version = 1 +revision = 1 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juaristi22 Date: Tue, 22 Jul 2025 11:51:39 +0200 Subject: [PATCH 3/4] add workflow files --- .github/workflows/changelog_entry.yaml | 29 +++++++++++ .github/workflows/main.yml | 58 ++++++++++++++++++++++ .github/workflows/pr.yaml | 66 ++++++++++++++++++++++++++ .github/workflows/versioning.yaml | 38 +++++++++++++++ 4 files changed, 191 insertions(+) create mode 100644 .github/workflows/changelog_entry.yaml create mode 100644 .github/workflows/main.yml create mode 100644 .github/workflows/pr.yaml create mode 100644 .github/workflows/versioning.yaml diff --git a/.github/workflows/changelog_entry.yaml b/.github/workflows/changelog_entry.yaml new file mode 100644 index 0000000..911c28e --- /dev/null +++ b/.github/workflows/changelog_entry.yaml @@ -0,0 +1,29 @@ +name: Versioning + +on: + pull_request: + branches: [ main ] + +jobs: + check-changelog-entry: + name: Changelog entry check + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@v3 + + - name: Check for changelog entry + run: | + if [ ! -f "changelog_entry.yaml" ]; then + echo "Error: changelog_entry.yaml file is missing." + echo "Please add a changelog_entry.yaml file at the root of the repository." + exit 1 + fi + + # Check if the file is empty + if [ ! -s "changelog_entry.yaml" ]; then + echo "Error: changelog_entry.yaml file is empty." + echo "Please add content to the changelog_entry.yaml file." + exit 1 + fi + + echo "Changelog entry found and is not empty." diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml new file mode 100644 index 0000000..86e9d41 --- /dev/null +++ b/.github/workflows/main.yml @@ -0,0 +1,58 @@ +name: CI + +on: + push: + branches: [ main ] + +jobs: + Test: + runs-on: ubuntu-latest + strategy: + matrix: + python-version: ["3.11"] + + steps: + - name: Checkout repo + uses: actions/checkout@v3 + - name: Install uv + uses: astral-sh/setup-uv@v5 + - name: Set up Python ${{ matrix.python-version }} + uses: actions/setup-python@v4 + with: + python-version: ${{ matrix.python-version }} + - name: Install Python dependencies + run: | + uv pip install -e ".[dev]" --system + - name: Run tests with coverage + run: make test + - name: Upload coverage to Codecov + uses: codecov/codecov-action@v3 + with: + file: ./coverage.xml + fail_ci_if_error: false + verbose: true + publish-to-pypi: + name: Publish to PyPI + needs: Test + runs-on: ubuntu-latest + steps: + - name: Checkout code + uses: actions/checkout@v4 + with: + fetch-depth: 0 # Fetch all history for all tags and branches + - name: Set up Python + uses: actions/setup-python@v5 + with: + python-version: ${{ matrix.python-version }} + - name: Install package + run: make install + - name: Build package + run: python -m build + - name: Publish a git tag + run: ".github/publish-git-tag.sh || true" + - name: Publish to PyPI + uses: pypa/gh-action-pypi-publish@release/v1 + with: + user: __token__ + password: ${{ secrets.PYPI }} + skip-existing: true diff --git a/.github/workflows/pr.yaml b/.github/workflows/pr.yaml new file mode 100644 index 0000000..b2e6cc6 --- /dev/null +++ b/.github/workflows/pr.yaml @@ -0,0 +1,66 @@ +name: Pull request +on: + pull_request: + branches: [ main ] + +jobs: + Lint: + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@v3 + - name: Set up Python + uses: actions/setup-python@v4 + with: + python-version: "3.11" + - name: Install uv + uses: astral-sh/setup-uv@v5 + - name: Install relevant dependencies + run: | + uv pip install black isort linecheck --system + - name: Check code formatting + run: make check-format + + Test: + strategy: + matrix: + os: [ ubuntu-latest ] + python-version: ["3.11"] + fail-fast: false + runs-on: ${{ matrix.os }} + steps: + - name: Checkout repo + uses: actions/checkout@v3 + - name: Install uv + uses: astral-sh/setup-uv@v5 + - name: Set up Python ${{ matrix.python-version }} + uses: actions/setup-python@v4 + with: + python-version: ${{ matrix.python-version }} + - name: Install Python dependencies + run: | + uv pip install -e ".[dev]" --system + - name: Run tests with coverage + run: make test + - name: Upload coverage to Codecov + uses: codecov/codecov-action@v3 + with: + file: ./coverage.xml + fail_ci_if_error: false + verbose: true + + Build: + runs-on: ubuntu-latest + steps: + - name: Checkout repo + uses: actions/checkout@v3 + - name: Install uv + uses: astral-sh/setup-uv@v5 + - name: Set up Python + uses: actions/setup-python@v4 + with: + python-version: "3.11" + - name: Install dependencies + run: | + uv pip install -e ".[dev]" --system + - name: Build package + run: make build diff --git a/.github/workflows/versioning.yaml b/.github/workflows/versioning.yaml new file mode 100644 index 0000000..acb6361 --- /dev/null +++ b/.github/workflows/versioning.yaml @@ -0,0 +1,38 @@ +# Workflow that runs on versioning metadata updates. + +name: Versioning updates +on: + push: + branches: + - main + + paths: + - changelog_entry.yaml + - "!pyproject.toml" + +jobs: + Versioning: + runs-on: ubuntu-latest + if: | + (!(github.event.head_commit.message == 'Update package version')) + steps: + - name: Checkout repo + uses: actions/checkout@v4 + with: + repository: ${{ github.event.pull_request.head.repo.full_name }} + ref: ${{ github.event.pull_request.head.ref }} + token: ${{ secrets.POLICYENGINE_GITHUB }} + - name: Setup Python + uses: actions/setup-python@v5 + with: + python-version: 3.11 + - name: Build changelog + run: pip install yaml-changelog && make changelog + - name: Preview changelog update + run: ".github/get-changelog-diff.sh" + - name: Update changelog + uses: EndBug/add-and-commit@v9 + with: + add: "." + message: Update package version + \ No newline at end of file From 1c99bdd77a9929c93d67f9c346c380f844e49b83 Mon Sep 17 00:00:00 2001 From: juaristi22 Date: Tue, 22 Jul 2025 13:54:55 +0200 Subject: [PATCH 4/4] more dependencies --- pyproject.toml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/pyproject.toml b/pyproject.toml index 27cc66c..75e29b2 100644 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