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Merge pull request #27 from kmansouri/master
v2.7-beta1
2 parents 83106bf + 32b9267 commit ab5a365

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Install_guide.pdf

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OPERA_Data.zip

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OPERA_Source_code/Endpoints.txt

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StrP v2.5 MW, nAtoms, nHeavyAtoms, nC, nO, nN, nAromAtom, nRing, nHeteroRing, Sp3Sp2HybRatio, nRotBd, nHBdAcc, nHBdDon, LipinskiFails, ToPolSurf, MRefract, Polarizability
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Physicochemical properties:
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LogP v2.5 Octanol-water partition coefficient
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MP v2.5 Melting Point
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BP v2.5 Boiling Point at 760 mm Hg
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VP v2.5 Vapor Pressure
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WS v2.1 Water solubility at 25C
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HL v2.5 Henrys Law constant (air/water partition coefficient)
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KOA v2.5 The octanol/air partition coefficient.
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RT v2.5 HPLC retention time.
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pKa v2.5 Logarithmic (acid) dissociation constant
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LogD v2.5 Octanol-water distribution coefficient
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LogP v2.6 Octanol-water partition coefficient
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MP v2.6 Melting Point
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BP v2.6 Boiling Point at 760 mm Hg
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VP v2.6 Vapor Pressure
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WS v2.6 Water solubility at 25C
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HL v2.6 Henrys Law constant (air/water partition coefficient)
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KOA v2.6 The octanol/air partition coefficient.
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RT v2.6 HPLC retention time.
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pKa v2.6 Logarithmic (acid) dissociation constant
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LogD v2.6 Octanol-water distribution coefficient
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Environmental fate:
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LogBCF v2.5 Fish bioconcentration factor
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AOH v2.5 OH rate constant for atmospheric gas-phase reactions
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BioDeg v2.5 Biodegradation half-life in days
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RBioDeg v2.5 Ready biodegradability of organic chemicals
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KM v2.5 Whole body primary biotransformation rate constant.
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KOC v2.5 Soil adsorption coefficient of organic compounds.
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LogBCF v2.6 Fish bioconcentration factor
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AOH v2.6 OH rate constant for atmospheric gas-phase reactions
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BioDeg v2.6 Biodegradation half-life in days
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RBioDeg v2.6 Ready biodegradability of organic chemicals
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KM v2.6 Whole body primary biotransformation rate constant.
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KOC v2.6 Soil adsorption coefficient of organic compounds.
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Toxicity endpoints:
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ER v2.5 Collaborative Estrogen Receptor Activity Prediction Project (CERAPP). Binding, Agonist and Antagonist ER activity
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AR v2.5 Collaborative Modeling Project for Androgen Receptor Activity (CoMPARA). Binding, Agonist and Antagonist AR activity
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AcuteTox v2.5 Collaborative Acute Toxicity Modeling Suite (CATMoS). Very-Toxic, Non-Toxic, EPA categories, GHS categories, LD50 (Log mg/kg)
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ER v2.6 Collaborative Estrogen Receptor Activity Prediction Project (CERAPP).
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AR v2.6 Collaborative Modeling Project for Androgen Receptor Activity (CoMPARA).
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AcuteTox v2.6 Collaborative Acute Toxicity Modeling Suite (CATMoS).
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ADME endpoints:
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FuB v2.5 Human plasma fraction unbound
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Clint v2.5 Human hepatic intrinsic clearance
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FuB v2.6 Human plasma fraction unbound
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Clint v2.6 Human hepatic intrinsic clearance
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For more information:
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[1] Mansouri K. et al. J Cheminform (2018) https://doi.org/10.1186/s13321-018-0263-1.
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[2] Mansouri, K. et al. SAR and QSAR in Env. Res. (2016). https://doi.org/10.1080/1062936X.2016.1253611
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[2] Mansouri, K. et al. SAR and QSAR in Env. Res. (2016). https://doi.org/10.1080/1062936X.2016.1253611

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