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README.md

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ConformerDependentCharges

Here we deposit the Supporting Information files for our paper "Evaluating the functional importance of conformer-dependent atomic partial charge assignment"

In our Supporting Information we include:

  • molecules/:
    • 3D structures of all the molecules used in our partial charge variability studies and absolute hydration free energy calculations
  • scripts/:
    • script used to generate partial charges from different random conformers for each molecule
    • script to calculate our partial charge variability metric "bond ∆q"
    • scripts to generate all the start files for our absolute hydration free energy calculations
  • simulations/:
    • all absolute hydration free energy calculation start files