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gui_BE.py
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276 lines (269 loc) · 16.4 KB
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# -*- coding: utf-8 -*-
# Form implementation generated from reading ui file './gui_BE.ui'
#
# Created by: PyQt5 UI code generator 5.15.9
#
# WARNING: Any manual changes made to this file will be lost when pyuic5 is
# run again. Do not edit this file unless you know what you are doing.
from PyQt5 import QtCore, QtGui, QtWidgets
class Ui_CRISPResso(object):
def setupUi(self, CRISPResso):
CRISPResso.setObjectName("CRISPResso")
CRISPResso.resize(1343, 1237)
self.centralwidget = QtWidgets.QWidget(CRISPResso)
self.centralwidget.setObjectName("centralwidget")
self.verticalLayout_3 = QtWidgets.QVBoxLayout(self.centralwidget)
self.verticalLayout_3.setObjectName("verticalLayout_3")
self.groupBox = QtWidgets.QGroupBox(self.centralwidget)
self.groupBox.setMaximumSize(QtCore.QSize(16777215, 150))
self.groupBox.setObjectName("groupBox")
self.horizontalLayout_2 = QtWidgets.QHBoxLayout(self.groupBox)
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.plainTextEdit_readIllumina = PlainTextEdit(self.groupBox)
self.plainTextEdit_readIllumina.setMaximumSize(QtCore.QSize(16777215, 250))
self.plainTextEdit_readIllumina.setObjectName("plainTextEdit_readIllumina")
self.horizontalLayout_2.addWidget(self.plainTextEdit_readIllumina)
self.pushButton_chooseFolder = QtWidgets.QPushButton(self.groupBox)
self.pushButton_chooseFolder.setObjectName("pushButton_chooseFolder")
self.horizontalLayout_2.addWidget(self.pushButton_chooseFolder)
self.verticalLayout_3.addWidget(self.groupBox)
self.frame_4 = QtWidgets.QFrame(self.centralwidget)
self.frame_4.setFrameShape(QtWidgets.QFrame.StyledPanel)
self.frame_4.setFrameShadow(QtWidgets.QFrame.Raised)
self.frame_4.setObjectName("frame_4")
self.horizontalLayout_7 = QtWidgets.QHBoxLayout(self.frame_4)
self.horizontalLayout_7.setObjectName("horizontalLayout_7")
self.label_4 = QtWidgets.QLabel(self.frame_4)
self.label_4.setWordWrap(True)
self.label_4.setObjectName("label_4")
self.horizontalLayout_7.addWidget(self.label_4)
self.groupBox_2 = QtWidgets.QGroupBox(self.frame_4)
self.groupBox_2.setMaximumSize(QtCore.QSize(150, 16777215))
self.groupBox_2.setAlignment(QtCore.Qt.AlignCenter)
self.groupBox_2.setObjectName("groupBox_2")
self.horizontalLayout_6 = QtWidgets.QHBoxLayout(self.groupBox_2)
self.horizontalLayout_6.setObjectName("horizontalLayout_6")
self.lineEdit_split = QtWidgets.QLineEdit(self.groupBox_2)
self.lineEdit_split.setClearButtonEnabled(True)
self.lineEdit_split.setObjectName("lineEdit_split")
self.horizontalLayout_6.addWidget(self.lineEdit_split)
self.horizontalLayout_7.addWidget(self.groupBox_2)
self.verticalLayout_3.addWidget(self.frame_4)
self.groupBox_info = QtWidgets.QGroupBox(self.centralwidget)
self.groupBox_info.setInputMethodHints(QtCore.Qt.ImhPreferNumbers)
self.groupBox_info.setFlat(False)
self.groupBox_info.setObjectName("groupBox_info")
self.verticalLayout = QtWidgets.QVBoxLayout(self.groupBox_info)
self.verticalLayout.setObjectName("verticalLayout")
self.checkBox_auto_fill_col = QtWidgets.QCheckBox(self.groupBox_info)
self.checkBox_auto_fill_col.setObjectName("checkBox_auto_fill_col")
self.verticalLayout.addWidget(self.checkBox_auto_fill_col)
self.tableWidget = QtWidgets.QTableWidget(self.groupBox_info)
self.tableWidget.setMinimumSize(QtCore.QSize(0, 300))
self.tableWidget.setObjectName("tableWidget")
self.tableWidget.setColumnCount(7)
self.tableWidget.setRowCount(1)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setHorizontalHeaderItem(0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setHorizontalHeaderItem(1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setHorizontalHeaderItem(2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setHorizontalHeaderItem(3, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setHorizontalHeaderItem(4, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setHorizontalHeaderItem(5, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setHorizontalHeaderItem(6, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(0, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(0, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(0, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(0, 3, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(0, 4, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(0, 5, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(0, 6, item)
self.tableWidget.horizontalHeader().setDefaultSectionSize(170)
self.verticalLayout.addWidget(self.tableWidget)
self.frame = QtWidgets.QFrame(self.groupBox_info)
self.frame.setFrameShape(QtWidgets.QFrame.StyledPanel)
self.frame.setFrameShadow(QtWidgets.QFrame.Raised)
self.frame.setObjectName("frame")
self.horizontalLayout = QtWidgets.QHBoxLayout(self.frame)
self.horizontalLayout.setObjectName("horizontalLayout")
self.pushButton_add_line = QtWidgets.QPushButton(self.frame)
self.pushButton_add_line.setObjectName("pushButton_add_line")
self.horizontalLayout.addWidget(self.pushButton_add_line)
self.pushButton_del_lines = QtWidgets.QPushButton(self.frame)
self.pushButton_del_lines.setObjectName("pushButton_del_lines")
self.horizontalLayout.addWidget(self.pushButton_del_lines)
self.pushButton_import_from_sheet = QtWidgets.QPushButton(self.frame)
self.pushButton_import_from_sheet.setObjectName("pushButton_import_from_sheet")
self.horizontalLayout.addWidget(self.pushButton_import_from_sheet)
self.pushButton_export_sheet = QtWidgets.QPushButton(self.frame)
self.pushButton_export_sheet.setObjectName("pushButton_export_sheet")
self.horizontalLayout.addWidget(self.pushButton_export_sheet)
self.pushButton_clear_table = QtWidgets.QPushButton(self.frame)
self.pushButton_clear_table.setObjectName("pushButton_clear_table")
self.horizontalLayout.addWidget(self.pushButton_clear_table)
self.verticalLayout.addWidget(self.frame)
self.frame_2 = QtWidgets.QFrame(self.groupBox_info)
self.frame_2.setFrameShape(QtWidgets.QFrame.StyledPanel)
self.frame_2.setFrameShadow(QtWidgets.QFrame.Raised)
self.frame_2.setObjectName("frame_2")
self.horizontalLayout_5 = QtWidgets.QHBoxLayout(self.frame_2)
self.horizontalLayout_5.setObjectName("horizontalLayout_5")
self.label_selection = QtWidgets.QLabel(self.frame_2)
self.label_selection.setObjectName("label_selection")
self.horizontalLayout_5.addWidget(self.label_selection)
self.verticalLayout.addWidget(self.frame_2)
self.frame_3 = QtWidgets.QFrame(self.groupBox_info)
self.frame_3.setFrameShape(QtWidgets.QFrame.StyledPanel)
self.frame_3.setFrameShadow(QtWidgets.QFrame.Raised)
self.frame_3.setObjectName("frame_3")
self.verticalLayout_4 = QtWidgets.QVBoxLayout(self.frame_3)
self.verticalLayout_4.setObjectName("verticalLayout_4")
self.label_3 = QtWidgets.QLabel(self.frame_3)
self.label_3.setObjectName("label_3")
self.verticalLayout_4.addWidget(self.label_3)
self.label_version = QtWidgets.QLabel(self.frame_3)
self.label_version.setObjectName("label_version")
self.verticalLayout_4.addWidget(self.label_version)
self.pushButton_install = QtWidgets.QPushButton(self.frame_3)
self.pushButton_install.setObjectName("pushButton_install")
self.verticalLayout_4.addWidget(self.pushButton_install)
self.verticalLayout.addWidget(self.frame_3)
self.verticalLayout_3.addWidget(self.groupBox_info)
self.groupBox_10 = QtWidgets.QGroupBox(self.centralwidget)
self.groupBox_10.setObjectName("groupBox_10")
self.verticalLayout_5 = QtWidgets.QVBoxLayout(self.groupBox_10)
self.verticalLayout_5.setObjectName("verticalLayout_5")
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.label_5 = QtWidgets.QLabel(self.groupBox_10)
self.label_5.setObjectName("label_5")
self.horizontalLayout_3.addWidget(self.label_5)
self.label_2 = QtWidgets.QLabel(self.groupBox_10)
self.label_2.setTextFormat(QtCore.Qt.MarkdownText)
self.label_2.setOpenExternalLinks(True)
self.label_2.setTextInteractionFlags(QtCore.Qt.TextBrowserInteraction)
self.label_2.setObjectName("label_2")
self.horizontalLayout_3.addWidget(self.label_2)
self.verticalLayout_5.addLayout(self.horizontalLayout_3)
self.plainTextEdit_parameters = PlainTextEdit(self.groupBox_10)
self.plainTextEdit_parameters.setMaximumSize(QtCore.QSize(16777215, 250))
self.plainTextEdit_parameters.setObjectName("plainTextEdit_parameters")
self.verticalLayout_5.addWidget(self.plainTextEdit_parameters)
self.pushButton_generateFq = QtWidgets.QPushButton(self.groupBox_10)
self.pushButton_generateFq.setObjectName("pushButton_generateFq")
self.verticalLayout_5.addWidget(self.pushButton_generateFq)
self.groupBox_status = QtWidgets.QGroupBox(self.groupBox_10)
self.groupBox_status.setObjectName("groupBox_status")
self.horizontalLayout_4 = QtWidgets.QHBoxLayout(self.groupBox_status)
self.horizontalLayout_4.setObjectName("horizontalLayout_4")
self.progressBar = QtWidgets.QProgressBar(self.groupBox_status)
self.progressBar.setMaximum(0)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.horizontalLayout_4.addWidget(self.progressBar)
self.pushButton_stop = QtWidgets.QPushButton(self.groupBox_status)
self.pushButton_stop.setObjectName("pushButton_stop")
self.horizontalLayout_4.addWidget(self.pushButton_stop)
self.verticalLayout_5.addWidget(self.groupBox_status)
self.lineEdit_FqDir = QtWidgets.QLineEdit(self.groupBox_10)
self.lineEdit_FqDir.setClearButtonEnabled(True)
self.lineEdit_FqDir.setObjectName("lineEdit_FqDir")
self.verticalLayout_5.addWidget(self.lineEdit_FqDir)
self.pushButton_openFqDir = QtWidgets.QPushButton(self.groupBox_10)
self.pushButton_openFqDir.setObjectName("pushButton_openFqDir")
self.verticalLayout_5.addWidget(self.pushButton_openFqDir)
self.verticalLayout_3.addWidget(self.groupBox_10)
self.label = QtWidgets.QLabel(self.centralwidget)
self.label.setObjectName("label")
self.verticalLayout_3.addWidget(self.label)
CRISPResso.setCentralWidget(self.centralwidget)
self.menubar = QtWidgets.QMenuBar(CRISPResso)
self.menubar.setGeometry(QtCore.QRect(0, 0, 1343, 28))
self.menubar.setObjectName("menubar")
CRISPResso.setMenuBar(self.menubar)
self.statusbar = QtWidgets.QStatusBar(CRISPResso)
self.statusbar.setObjectName("statusbar")
CRISPResso.setStatusBar(self.statusbar)
self.retranslateUi(CRISPResso)
QtCore.QMetaObject.connectSlotsByName(CRISPResso)
def retranslateUi(self, CRISPResso):
_translate = QtCore.QCoreApplication.translate
CRISPResso.setWindowTitle(_translate("CRISPResso", "BE分析"))
self.groupBox.setTitle(_translate("CRISPResso", "fastq数据文件夹"))
self.pushButton_chooseFolder.setText(_translate("CRISPResso", "选择文件夹"))
self.label_4.setText(_translate("CRISPResso", "文件路径不能出现空格！样品名请根据测序文件名填写。例如，测序文件名是DS2-165_R1.fq.gz和DS2-165_R2.fq.gz，设置的分隔符是“_”，那么样品名就写第一个下划线_前的内容，即DS2-165。或者你可以把分隔副设为“_R”，程序也是直接识别测序文件名第一个\"_R\"之前的内容为样品名这样程序就能自动根据样品名给你匹配fastq文件。“描述”一栏请尽量写详细，这个是给你自己看的！"))
self.groupBox_2.setTitle(_translate("CRISPResso", "样品名分隔符"))
self.lineEdit_split.setText(_translate("CRISPResso", "_"))
self.groupBox_info.setTitle(_translate("CRISPResso", "基本信息"))
self.checkBox_auto_fill_col.setText(_translate("CRISPResso", "自动向下填充"))
item = self.tableWidget.verticalHeaderItem(0)
item.setText(_translate("CRISPResso", "示例"))
item = self.tableWidget.horizontalHeaderItem(0)
item.setText(_translate("CRISPResso", "样品名"))
item = self.tableWidget.horizontalHeaderItem(1)
item.setText(_translate("CRISPResso", "描述"))
item = self.tableWidget.horizontalHeaderItem(2)
item.setText(_translate("CRISPResso", "sg"))
item = self.tableWidget.horizontalHeaderItem(3)
item.setText(_translate("CRISPResso", "原始序列"))
item = self.tableWidget.horizontalHeaderItem(4)
item.setText(_translate("CRISPResso", "原始碱基"))
item = self.tableWidget.horizontalHeaderItem(5)
item.setText(_translate("CRISPResso", "修改后碱基"))
item = self.tableWidget.horizontalHeaderItem(6)
item.setText(_translate("CRISPResso", "最想看的位置"))
__sortingEnabled = self.tableWidget.isSortingEnabled()
self.tableWidget.setSortingEnabled(False)
item = self.tableWidget.item(0, 0)
item.setText(_translate("CRISPResso", "DS2-165"))
item = self.tableWidget.item(0, 1)
item.setText(_translate("CRISPResso", "PE-SITE3+2TtoG-Cas9"))
item = self.tableWidget.item(0, 2)
item.setText(_translate("CRISPResso", "aacacaccgggttaat "))
item = self.tableWidget.item(0, 3)
item.setText(_translate("CRISPResso", "atgttttttattgttttgttttcctcctggaaaaatatgaacagtg..."))
item = self.tableWidget.item(0, 4)
item.setText(_translate("CRISPResso", "t"))
item = self.tableWidget.item(0, 5)
item.setText(_translate("CRISPResso", "C"))
item = self.tableWidget.item(0, 6)
item.setText(_translate("CRISPResso", "2"))
self.tableWidget.setSortingEnabled(__sortingEnabled)
self.pushButton_add_line.setText(_translate("CRISPResso", "加一行"))
self.pushButton_del_lines.setText(_translate("CRISPResso", "删除选中行"))
self.pushButton_import_from_sheet.setText(_translate("CRISPResso", "从表格导入"))
self.pushButton_export_sheet.setText(_translate("CRISPResso", "导出当前表格"))
self.pushButton_clear_table.setText(_translate("CRISPResso", "清空"))
self.label_selection.setText(_translate("CRISPResso", "TextLabel"))
self.label_3.setText(_translate("CRISPResso", "CRISPResso2安装信息："))
self.label_version.setText(_translate("CRISPResso", "TextLabel"))
self.pushButton_install.setText(_translate("CRISPResso", "安装CRISPResso2"))
self.groupBox_10.setTitle(_translate("CRISPResso", "操作"))
self.label_5.setText(_translate("CRISPResso", "参数设置:"))
self.label_2.setText(_translate("CRISPResso", "[点击查看参数介绍](https://gitee.com/MasterChiefm/NGS_Tools/blob/master/help/parameters.md)"))
self.plainTextEdit_parameters.setPlainText(_translate("CRISPResso", "--exclude_bp_from_left 1\n"
" --exclude_bp_from_right 1\n"
"--min_average_read_quality 10\n"
""))
self.pushButton_generateFq.setText(_translate("CRISPResso", "开始"))
self.groupBox_status.setTitle(_translate("CRISPResso", "运行中，先去做实验吧！"))
self.progressBar.setFormat(_translate("CRISPResso", "%v / %m"))
self.pushButton_stop.setText(_translate("CRISPResso", "终止并生成报告"))
self.pushButton_openFqDir.setText(_translate("CRISPResso", "打开结果文件夹"))
self.label.setText(_translate("CRISPResso", "当前选定："))
from plaintextedit import PlainTextEdit