diff --git a/src/org/labkey/targetedms/parser/SkylineDocumentParser.java b/src/org/labkey/targetedms/parser/SkylineDocumentParser.java
index 1b9ad3d4c..2babc63b4 100644
--- a/src/org/labkey/targetedms/parser/SkylineDocumentParser.java
+++ b/src/org/labkey/targetedms/parser/SkylineDocumentParser.java
@@ -405,7 +405,7 @@ private ExpData parseChromatograms(@NotNull Container container, @NotNull User u
             {
                 result = ExperimentService.get().createData(container, SkylineBinaryParser.DATA_TYPE);
                 result.setName(skydFile.getName());
-                result.setDataFileURI(skydFile.toURI());
+                result.setDataFileURI(skydFile.toPath().toUri());
                 result.save(user);
             }
             return result;