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[meemee@lassen709:serac]$ python3 test-hatchet.py
<IPython.core.display.Javascript object>
Traceback (most recent call last):
File "test-hatchet.py", line 19, in <module>
db = spotdb.connect(input_db_uri_str)
File "/usr/gapps/spot/live//spotdb/spotdb/spotdb_base.py", line 116, in connect
raise SpotDBError("Unknown Spot database format: " + database_key)
spotdb.spotdb_base.SpotDBError: Unknown Spot database format: ./mpi
[meemee@lassen709:serac]$ which python3
/usr/tcetmp/bin/python3
Usually I module load python/3.8, when I do that:
[meemee@lassen709:serac]$ python3 test-hatchet.py
<IPython.core.display.Javascript object>
--------------------------------------------------------------------------------
Error: Shared object (.so) not found for cython module.
Please run install.sh from the hatchet root directory to build modules.
--------------------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/gapps/spot/live//hatchet/ppc64le/hatchet/graphframe.py", line 24, in <module>
from .cython_modules.libs import graphframe_modules as _gfm_cy
ImportError: dynamic module does not define module export function (PyInit_graphframe_modules)
Traceback (most recent call last):
File "test-hatchet.py", line 13, in <module>
import hatchet
File "/usr/gapps/spot/live//hatchet/ppc64le/hatchet/__init__.py", line 9, in <module>
from .graphframe import GraphFrame
File "/usr/gapps/spot/live//hatchet/ppc64le/hatchet/graphframe.py", line 24, in <module>
from .cython_modules.libs import graphframe_modules as _gfm_cy
ImportError: dynamic module does not define module export function (PyInit_graphframe_modules)
[meemee@lassen709:serac]$ which python3
/usr/tce/packages/python/python-3.8.2/bin/python3
It looks like the hatchet versions on LC are a bit old.
[meemee@lassen709:serac]$ ls -lha /usr/gapps/spot/live//hatchet/
total 24K
drwxrwsr-x 4 pascal spotdev 4.0K Feb 3 2021 .
drwxrwsr-x 11 pascal spotdev 4.0K Oct 10 10:58 ..
-rwxrwxr-x 1 pascal spotdev 374 Aug 3 2022 check-hatchet-perms.sh
drwxrwsr-x 7 pascal spotdev 4.0K Aug 3 2022 ppc64le
-rwxrwxr-x 1 pascal spotdev 551 Aug 3 2022 set-hatchet-perms.sh
drwxrwsr-x 7 pascal spotdev 4.0K Aug 3 2022 x86_64
Works fine on ruby though.
Should I just use thicket? Is thicket hosted on LC somewhere?
The text was updated successfully, but these errors were encountered:
Hello, I've been working on a script that uses hatchet came across this issue on lassen.
Steps to reproduce:
ssh lassen
test-hatchet.py
filechmod +x test-hatchet.py
Usually I
module load python/3.8
, when I do that:It looks like the hatchet versions on LC are a bit old.
Works fine on
ruby
though.Should I just use thicket? Is thicket hosted on LC somewhere?
The text was updated successfully, but these errors were encountered: