diff --git a/MuPoMo_bootstrap/Histogram of theta1.pdf b/MuPoMo_bootstrap/Histogram of theta1.pdf deleted file mode 100644 index 219f24b..0000000 Binary files a/MuPoMo_bootstrap/Histogram of theta1.pdf and /dev/null differ diff --git a/MuPoMo_bootstrap/Histogram of theta1.png b/MuPoMo_bootstrap/Histogram of theta1.png new file mode 100644 index 0000000..24c733b Binary files /dev/null and b/MuPoMo_bootstrap/Histogram of theta1.png differ diff --git a/MuPoMo_bootstrap/Metainfo.txt b/MuPoMo_bootstrap/Metainfo.txt index e888743..42fb734 100644 --- a/MuPoMo_bootstrap/Metainfo.txt +++ b/MuPoMo_bootstrap/Metainfo.txt @@ -2,14 +2,13 @@ Name of QuantLet : MuPoMo_bootstrap Published in : MuPoMo -Description : ‘Forecasts mortality rates based on a semi-parametric approach, and bootstraps time series with innovation to compute - the prediction intervals. Uses random two countries to demonstrate.’ +Description : 'Forecasts mortality rates based on a semi-parametric approach, and bootstraps time series with innovation to compute the prediction intervals. Uses random two countries to demonstrate.' -Keywords : ‘time series, demography, mortality, population, nonparametric smoothing, parametric modelling, Lee-Carter method, - bootstrap’ +Keywords : 'time series, demography, mortality, population, nonparametric smoothing, parametric modelling, Lee-Carter method, + bootstrap' -See also : ‘MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, - MuPoMo_referencecurve, MuPoMo_main_twopop, MuPoMo_main_multipop’ +See also : 'MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, + MuPoMo_referencecurve, MuPoMo_main_twopop, MuPoMo_main_multipop' Author : Lei Fang diff --git a/MuPoMo_bootstrap/Prediction intervals at different levels.pdf b/MuPoMo_bootstrap/Prediction intervals at different levels.pdf deleted file mode 100644 index 1758004..0000000 Binary files a/MuPoMo_bootstrap/Prediction intervals at different levels.pdf and /dev/null differ diff --git a/MuPoMo_bootstrap/Prediction intervals at different levels.png b/MuPoMo_bootstrap/Prediction intervals at different levels.png new file mode 100644 index 0000000..5708b3b Binary files /dev/null and b/MuPoMo_bootstrap/Prediction intervals at different levels.png differ diff --git a/MuPoMo_bootstrap/README.md b/MuPoMo_bootstrap/README.md new file mode 100644 index 0000000..fcf400a --- /dev/null +++ b/MuPoMo_bootstrap/README.md @@ -0,0 +1,34 @@ +
+ +Header Image + +
+ +``` +Name of QuantLet: MuPoMo_bootstrap + +Published in: MuPoMo + +Description: Forecasts mortality rates based on a semi-parametric approach, and bootstraps time series with innovation to compute the prediction intervals. Uses random two countries to demonstrate. + +Keywords: time series, demography, mortality, population, nonparametric smoothing, parametric modelling, Lee-Carter method, + +See also: MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, + +Author: Lei Fang + +Submitted: Mon, June 13 2016 by Lei Fang + +Example: +- Prediction intervals at different levels +- Histogram of theta1 + +``` +
+Image +
+ +
+Image +
+ diff --git a/MuPoMo_data/Metainfo.txt b/MuPoMo_data/Metainfo.txt index 0b6efd1..c9e4bdb 100644 --- a/MuPoMo_data/Metainfo.txt +++ b/MuPoMo_data/Metainfo.txt @@ -3,12 +3,12 @@ Name of QuantLet : MuPoMo_data Published in : MuPoMo Description : 'Reads data from Human Mortality Database and calculate kt, and will be called - in MuPoMo_main_twopop and MuPoMo_main_multipop.’ + in MuPoMo_main_twopop and MuPoMo_main_multipop.' -Keywords : ‘time series, demography, mortality, Lee-Carter method, population, Human Mortality Database’ +Keywords : 'time series, demography, mortality, Lee-Carter method, population, Human Mortality Database' -See also : ‘MuPoMo_optimization, MuPoMo_normalization, MuPoMo_referencecurve, - MuPoMo_main_twopop, MuPoMo_main_multipop, MuPoMo_bootstrap’ +See also : 'MuPoMo_optimization, MuPoMo_normalization, MuPoMo_referencecurve, + MuPoMo_main_twopop, MuPoMo_main_multipop, MuPoMo_bootstrap' Author : Lei Fang diff --git a/MuPoMo_data/README.md b/MuPoMo_data/README.md new file mode 100644 index 0000000..625e515 --- /dev/null +++ b/MuPoMo_data/README.md @@ -0,0 +1,22 @@ +
+ +Header Image + +
+ +``` +Name of QuantLet: MuPoMo_data + +Published in: MuPoMo + +Description: Reads data from Human Mortality Database and calculate kt, and will be called + +Keywords: time series, demography, mortality, Lee-Carter method, population, Human Mortality Database + +See also: MuPoMo_optimization, MuPoMo_normalization, MuPoMo_referencecurve, + +Author: Lei Fang + +Submitted: Mon, June 13 2016 by Lei Fang + +``` diff --git a/MuPoMo_main_multipop/Metainfo.txt b/MuPoMo_main_multipop/Metainfo.txt index 6b94f6d..d282fce 100644 --- a/MuPoMo_main_multipop/Metainfo.txt +++ b/MuPoMo_main_multipop/Metainfo.txt @@ -3,12 +3,12 @@ Name of QuantLet : MuPoMo_main_multipop Published in : MuPoMo Description : 'Estimates and forecasts mortality rates based on a semi-parametric approach, which applies parametric modelling for - multiple nonparametric smoothed curves with the shape-related nonlinear variation.’ + multiple nonparametric smoothed curves with the shape-related nonlinear variation.' -Keywords : ‘time series, demography, mortality, population, nonparametric smoothing, parametric modelling, Lee-Carter method’ +Keywords : 'time series, demography, mortality, population, nonparametric smoothing, parametric modelling, Lee-Carter method' -See also : ‘MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, - MuPoMo_referencecurve, MuPoMo_main_twopop, MuPoMo_bootstrap’ +See also : 'MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, + MuPoMo_referencecurve, MuPoMo_main_twopop, MuPoMo_bootstrap' Author : Lei Fang diff --git a/MuPoMo_main_multipop/Multi-Population model with German data.pdf b/MuPoMo_main_multipop/Multi-Population model with German data.pdf deleted file mode 100644 index 8e3fdb2..0000000 Binary files a/MuPoMo_main_multipop/Multi-Population model with German data.pdf and /dev/null differ diff --git a/MuPoMo_main_multipop/Multi-Population model with German data.png b/MuPoMo_main_multipop/Multi-Population model with German data.png new file mode 100644 index 0000000..06b20bb Binary files /dev/null and b/MuPoMo_main_multipop/Multi-Population model with German data.png differ diff --git a/MuPoMo_main_multipop/Multi-Population model with Japanese data.pdf b/MuPoMo_main_multipop/Multi-Population model with Japanese data.pdf deleted file mode 100644 index de4bafe..0000000 Binary files a/MuPoMo_main_multipop/Multi-Population model with Japanese data.pdf and /dev/null differ diff --git a/MuPoMo_main_multipop/Multi-Population model with Japanese data.png b/MuPoMo_main_multipop/Multi-Population model with Japanese data.png new file mode 100644 index 0000000..fb4cd42 Binary files /dev/null and b/MuPoMo_main_multipop/Multi-Population model with Japanese data.png differ diff --git a/MuPoMo_main_multipop/README.md b/MuPoMo_main_multipop/README.md new file mode 100644 index 0000000..80bb453 --- /dev/null +++ b/MuPoMo_main_multipop/README.md @@ -0,0 +1,34 @@ +
+ +Header Image + +
+ +``` +Name of QuantLet: MuPoMo_main_multipop + +Published in: MuPoMo + +Description: Estimates and forecasts mortality rates based on a semi-parametric approach, which applies parametric modelling for + +Keywords: time series, demography, mortality, population, nonparametric smoothing, parametric modelling, Lee-Carter method + +See also: MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, + +Author: Lei Fang + +Submitted: Mon, June 13 2016 by Lei Fang + +Example: +- Multi-Population model with German data +- Multi-Population model with Japanese data + +``` +
+Image +
+ +
+Image +
+ diff --git a/MuPoMo_main_twopop/Contour plot of theta2 and theta4.pdf b/MuPoMo_main_twopop/Contour plot of theta2 and theta4.pdf deleted file mode 100644 index 6afd5a7..0000000 Binary files a/MuPoMo_main_twopop/Contour plot of theta2 and theta4.pdf and /dev/null differ diff --git a/MuPoMo_main_twopop/Contour plot of theta2 and theta4.png b/MuPoMo_main_twopop/Contour plot of theta2 and theta4.png new file mode 100644 index 0000000..9f7faec Binary files /dev/null and b/MuPoMo_main_twopop/Contour plot of theta2 and theta4.png differ diff --git a/MuPoMo_main_twopop/Loss function of theta2.pdf b/MuPoMo_main_twopop/Loss function of theta2.pdf deleted file mode 100644 index e4b18e0..0000000 Binary files a/MuPoMo_main_twopop/Loss function of theta2.pdf and /dev/null differ diff --git a/MuPoMo_main_twopop/Loss function of theta2.png b/MuPoMo_main_twopop/Loss function of theta2.png new file mode 100644 index 0000000..9ab2589 Binary files /dev/null and b/MuPoMo_main_twopop/Loss function of theta2.png differ diff --git a/MuPoMo_main_twopop/Metainfo.txt b/MuPoMo_main_twopop/Metainfo.txt index 09b2ce3..8a599d9 100644 --- a/MuPoMo_main_twopop/Metainfo.txt +++ b/MuPoMo_main_twopop/Metainfo.txt @@ -4,13 +4,13 @@ Published in : MuPoMo Description : 'Estimates and forecasts mortality rates based on a semi-parametric approach, which applies parametric modelling for multiple nonparametric curves with the shape-related nonlinear variation. Uses random two countries to demonstrate - two-country case.’ + two-country case.' -Keywords : ‘time series, demography, mortality, population, nonparametric smoothing, parametric modelling, Lee-Carter method, - contour’ +Keywords : 'time series, demography, mortality, population, nonparametric smoothing, parametric modelling, Lee-Carter method, + contour' -See also : ‘MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, - MuPoMo_referencecurve, MuPoMo_main_multipop, MuPoMo_bootstrap’ +See also : 'MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, + MuPoMo_referencecurve, MuPoMo_main_multipop, MuPoMo_bootstrap' Author : Lei Fang diff --git a/MuPoMo_main_twopop/Model fit and forecast.pdf b/MuPoMo_main_twopop/Model fit and forecast.pdf deleted file mode 100644 index a7ac9f9..0000000 Binary files a/MuPoMo_main_twopop/Model fit and forecast.pdf and /dev/null differ diff --git a/MuPoMo_main_twopop/Model fit and forecast.png b/MuPoMo_main_twopop/Model fit and forecast.png new file mode 100644 index 0000000..9a1c4ef Binary files /dev/null and b/MuPoMo_main_twopop/Model fit and forecast.png differ diff --git a/MuPoMo_main_twopop/README.md b/MuPoMo_main_twopop/README.md new file mode 100644 index 0000000..2ace6bf --- /dev/null +++ b/MuPoMo_main_twopop/README.md @@ -0,0 +1,49 @@ +
+ +Header Image + +
+ +``` +Name of QuantLet: MuPoMo_main_twopop + +Published in: MuPoMo + +Description: Estimates and forecasts mortality rates based on a semi-parametric approach, which applies parametric modelling for + +Keywords: time series, demography, mortality, population, nonparametric smoothing, parametric modelling, Lee-Carter method, + +See also: MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, + +Author: Lei Fang + +Submitted: Mon, June 13 2016 by Lei Fang + +Example: +- Time shift at different levels +- Loss function of theta2 +- Loss surface 3D +- Contour plot of theta2 and theta4 +- Model fit and forecast + +``` +
+Image +
+ +
+Image +
+ +
+Image +
+ +
+Image +
+ +
+Image +
+ diff --git a/MuPoMo_main_twopop/Time shift at different levels.pdf b/MuPoMo_main_twopop/Time shift at different levels.pdf deleted file mode 100644 index 0e40101..0000000 Binary files a/MuPoMo_main_twopop/Time shift at different levels.pdf and /dev/null differ diff --git a/MuPoMo_main_twopop/Time shift at different levels.png b/MuPoMo_main_twopop/Time shift at different levels.png new file mode 100644 index 0000000..8da33be Binary files /dev/null and b/MuPoMo_main_twopop/Time shift at different levels.png differ diff --git a/MuPoMo_normalization/Metainfo.txt b/MuPoMo_normalization/Metainfo.txt index 6b7884e..5f8975c 100644 --- a/MuPoMo_normalization/Metainfo.txt +++ b/MuPoMo_normalization/Metainfo.txt @@ -3,12 +3,12 @@ Name of QuantLet : MuPoMo_normalization Published in : MuPoMo Description : 'Normalizes optimal shape variation parameters theta estimated from MuPoMo_optimization, and will be - called in MuPoMo_main_multipop.’ + called in MuPoMo_main_multipop.' -Keywords : ‘time series, demography, mortality, population, normalization’ +Keywords : 'time series, demography, mortality, population, normalization' -See also : ‘MuPoMo_data, MuPoMo_optimization, MuPoMo_referencecurve, - MuPoMo_main_twopop, MuPoMo_main_multipop, MuPoMo_bootstrap’ +See also : 'MuPoMo_data, MuPoMo_optimization, MuPoMo_referencecurve, + MuPoMo_main_twopop, MuPoMo_main_multipop, MuPoMo_bootstrap' Author : Lei Fang diff --git a/MuPoMo_normalization/README.md b/MuPoMo_normalization/README.md new file mode 100644 index 0000000..2517f17 --- /dev/null +++ b/MuPoMo_normalization/README.md @@ -0,0 +1,22 @@ +
+ +Header Image + +
+ +``` +Name of QuantLet: MuPoMo_normalization + +Published in: MuPoMo + +Description: Normalizes optimal shape variation parameters theta estimated from MuPoMo_optimization, and will be + +Keywords: time series, demography, mortality, population, normalization + +See also: MuPoMo_data, MuPoMo_optimization, MuPoMo_referencecurve, + +Author: Lei Fang + +Submitted: Mon, June 13 2016 by Lei Fang + +``` diff --git a/MuPoMo_optimization/Metainfo.txt b/MuPoMo_optimization/Metainfo.txt index 3586057..39d4310 100644 --- a/MuPoMo_optimization/Metainfo.txt +++ b/MuPoMo_optimization/Metainfo.txt @@ -3,12 +3,12 @@ Name of QuantLet : MuPoMo_optimization Published in : MuPoMo Description : 'Optimizes shape variation parameters theta based on kt and reference curve - to update new kt, and will be called in MuPoMo_main_twopop and MuPoMo_main_multipop.’ + to update new kt, and will be called in MuPoMo_main_twopop and MuPoMo_main_multipop.' -Keywords : ‘time series, demography, mortality, population, nonlinear, optimization, non parametric smoothing’ +Keywords : 'time series, demography, mortality, population, nonlinear, optimization, non parametric smoothing' -See also : ‘MuPoMo_data, MuPoMo_normalization, MuPoMo_referencecurve, - MuPoMo_main_twopop, MuPoMo_main_multipop, MuPoMo_bootstrap’ +See also : 'MuPoMo_data, MuPoMo_normalization, MuPoMo_referencecurve, + MuPoMo_main_twopop, MuPoMo_main_multipop, MuPoMo_bootstrap' Author : Lei Fang, Juhyun Park diff --git a/MuPoMo_optimization/README.md b/MuPoMo_optimization/README.md new file mode 100644 index 0000000..c8e1105 --- /dev/null +++ b/MuPoMo_optimization/README.md @@ -0,0 +1,22 @@ +
+ +Header Image + +
+ +``` +Name of QuantLet: MuPoMo_optimization + +Published in: MuPoMo + +Description: Optimizes shape variation parameters theta based on kt and reference curve + +Keywords: time series, demography, mortality, population, nonlinear, optimization, non parametric smoothing + +See also: MuPoMo_data, MuPoMo_normalization, MuPoMo_referencecurve, + +Author: Lei Fang, Juhyun Park + +Submitted: Mon, June 13 2016 by Lei Fang + +``` diff --git a/MuPoMo_referencecurve/Metainfo.txt b/MuPoMo_referencecurve/Metainfo.txt index 3900ea6..73c8655 100644 --- a/MuPoMo_referencecurve/Metainfo.txt +++ b/MuPoMo_referencecurve/Metainfo.txt @@ -3,12 +3,12 @@ Name of QuantLet : MuPoMo_referencecurve Published in : MuPoMo Description : 'Regenerates reference curve (common trend) based on normalized optimal theta parameters and smoothed original kt, - and will be called in MuPoMo_main_multipop.’ + and will be called in MuPoMo_main_multipop.' -Keywords : ‘time series, demography, mortality, population, normalization’ +Keywords : 'time series, demography, mortality, population, normalization' -See also : ‘MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, - MuPoMo_main_twopop, MuPoMo_main_multipop, MuPoMo_bootstrap’ +See also : 'MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, + MuPoMo_main_twopop, MuPoMo_main_multipop, MuPoMo_bootstrap' Author : Lei Fang diff --git a/MuPoMo_referencecurve/README.md b/MuPoMo_referencecurve/README.md new file mode 100644 index 0000000..2665e22 --- /dev/null +++ b/MuPoMo_referencecurve/README.md @@ -0,0 +1,22 @@ +
+ +Header Image + +
+ +``` +Name of QuantLet: MuPoMo_referencecurve + +Published in: MuPoMo + +Description: Regenerates reference curve (common trend) based on normalized optimal theta parameters and smoothed original kt, + +Keywords: time series, demography, mortality, population, normalization + +See also: MuPoMo_data, MuPoMo_optimization, MuPoMo_normalization, + +Author: Lei Fang + +Submitted: Mon, June 13 2016 by Lei Fang + +``` diff --git a/yamldebugger_results.md b/yamldebugger_results.md new file mode 100644 index 0000000..74227d4 --- /dev/null +++ b/yamldebugger_results.md @@ -0,0 +1,9 @@ +|Q-Quali |Q folders |Q Names |Descriptions stats |Keywords stats |Meta Info data fields |Bad file names | +|:-------|:---------------------|:---------------------|:----------------------------|:------------------------|:-----------------------|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------| +|C |MuPoMo_bootstrap |MuPoMo_bootstrap |26 word(s), 156 Character(s) |8: 4 (standard), 4 (new) |q, p, a, d, k, e, s, sa |bad Q file names!: Histogram of theta1.png, Prediction intervals at different levels.png | +|A |MuPoMo_data |MuPoMo_data |21 word(s), 103 Character(s) |6: 3 (standard), 3 (new) |q, p, a, d, k, s, sa | | +|C |MuPoMo_main_multipop |MuPoMo_main_multipop |26 word(s), 171 Character(s) |7: 3 (standard), 4 (new) |q, p, a, d, k, e, s, sa |bad Q file names!: Multi-Population model with German data.png, Multi-Population model with Japanese data.png | +|C |MuPoMo_main_twopop |MuPoMo_main_twopop |34 word(s), 212 Character(s) |8: 4 (standard), 4 (new) |q, p, a, d, k, e, s, sa |bad Q file names!: Contour plot of theta2 and theta4.png, Loss function of theta2.png, Loss surface 3D.png, Model fit and forecast.png, Time shift at different levels.png | +|A |MuPoMo_normalization |MuPoMo_normalization |18 word(s), 112 Character(s) |5: 4 (standard), 1 (new) |q, p, a, d, k, s, sa | | +|A |MuPoMo_optimization |MuPoMo_optimization |27 word(s), 131 Character(s) |7: 4 (standard), 3 (new) |q, p, a, d, k, s, sa | | +|A |MuPoMo_referencecurve |MuPoMo_referencecurve |23 word(s), 131 Character(s) |5: 4 (standard), 1 (new) |q, p, a, d, k, s, sa | |