I builed a slab simulation for dsRNA and IDP based on your example for dsRNA. But it return 'RNA' object has no attribute 'init_restraint_force' when I run run.py
following is my component section:
components.add(name='W', molecule_type='protein', nmol=200, charge_termini='both')
components.add(name='dspolyR12', molecule_type='rna', nmol=50, fdomains=f'{cwd}/input/domains.yaml', pdb_folder=f'{cwd}/input', restraint=True,restraint_type='harmonic', k_harmonic=10, cutoff_restr=1.5, use_com = False, ext_restraint=False)
components.write(path,name='components.yaml')
how can I fix it
I builed a slab simulation for dsRNA and IDP based on your example for dsRNA. But it return 'RNA' object has no attribute 'init_restraint_force' when I run run.py
following is my component section:
components.add(name='W', molecule_type='protein', nmol=200, charge_termini='both')
components.add(name='dspolyR12', molecule_type='rna', nmol=50, fdomains=f'{cwd}/input/domains.yaml', pdb_folder=f'{cwd}/input', restraint=True,restraint_type='harmonic', k_harmonic=10, cutoff_restr=1.5, use_com = False, ext_restraint=False)
components.write(path,name='components.yaml')
how can I fix it