pyproject.toml

# LICENSE HEADER MANAGED BY add-license-header
#
# SPDX-FileCopyrightText: Copyright 2024 German Cancer Research Center (DKFZ) and contributors.
# SPDX-License-Identifier: MIT
#

[build-system]
requires = [
    "setuptools>=42",
    "wheel",
]
build-backend = "setuptools.build_meta"

[tool.pytest.ini_options]
addopts = "-p pytest_cov --cov --cov-append --strict-markers --junitxml=unit_test_report.xml --benchmark-disable"
testpaths = [
    "tests",
]
markers = [
    "slow: marks tests as slow (deselect with '-m \"not slow\"')",
    "gpu: marks tests as requiring a gpu to run",
    "env: marks test that require the correct underlying mml.env file",
    "plugin: marks tests that require the loading of plugins",
    "serial",
]

filterwarnings = [
    # note the use of single quote below to denote "raw" strings in TOML
    'ignore:MMLFilemanager was not created by BaseScheduler:UserWarning',  # often we mock the filemanager
    'ignore:.*not yet preprocessed. Pipeline contains.*:UserWarning',  # warning of non-preprocessed data
    'ignore:.*does not have many workers.*:UserWarning',  # warning for low number of workers
    'ignore:The number of training batches:UserWarning',  # warning for low number of batches
    'ignore:THIS BEHAVIOUR CHANGED:UserWarning',  # warning for mml behaviour changes
]

[tool.isort]
src_paths = ["src", "tests"]
profile = "black"
line_length = 120

[tool.mypy]
mypy_path = "src"
check_untyped_defs = true
disallow_any_generics = true
ignore_missing_imports = true
no_implicit_optional = true
show_error_codes = true
strict_equality = true
warn_redundant_casts = true
warn_return_any = true
warn_unreachable = true
warn_unused_configs = true
no_implicit_reexport = true
disallow_untyped_defs = true
warn_unused_ignores = true
allow_redefinition = true
warn_no_return = true

[tool.ruff]
# Set the maximum line length
line-length = 120