-
Notifications
You must be signed in to change notification settings - Fork 0
Description
The error on terminal after running the test and click on Analyze results
scipion3 tests xmipp3.tests.test_protocols_deepVolPostprocessing
Launching project in debug or optimized...
WARNING: MetaData: Error parsing column 'ctfVoltage' value.
WARNING: MetaData: Error parsing column 'ctfSphericalAberration' value.
WARNING: MetaData: Error parsing column 'ctfQ0' value.
WARNING: MetaData: Error parsing column 'enabled' value.
WARNING: MetaData: Error parsing column 'itemId' value.
WARNING: MetaData: Error parsing column 'micrograph' value.
WARNING!!! valueIn.failed = True, binding NULL
WARNING!!! valueIn.failed = True, binding NULL
WARNING!!! valueIn.failed = True, binding NULL
WARNING!!! valueIn.failed = True, binding NULL
WARNING!!! valueIn.failed = True, binding NULL
WARNING!!! valueIn.failed = True, binding NULL
path selfile Runs/000396_XmippParticlePickingAutomatic/extra/227.outputMicrographs_micrographs.xmd
Feb 27, 2026 11:30:11 AM xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker loadEmptyMicrographsFromMd
SEVERE: No such micrograph exists
java.lang.IllegalArgumentException: No such micrograph exists
at xmipp.viewer.particlepicker.Micrograph.(Micrograph.java:67)
at xmipp.viewer.particlepicker.Micrograph.(Micrograph.java:53)
at xmipp.viewer.particlepicker.training.model.SupervisedPickerMicrograph.(SupervisedPickerMicrograph.java:38)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.loadEmptyMicrographsFromMd(SupervisedParticlePicker.java:419)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.loadEmptyMicrographs(SupervisedParticlePicker.java:373)
at xmipp.viewer.particlepicker.ParticlePicker.(ParticlePicker.java:160)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.(SupervisedParticlePicker.java:76)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.(SupervisedParticlePicker.java:69)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.(SupervisedParticlePicker.java:122)
at xmipp.viewer.particlepicker.training.SupervisedPickerRunner.run(SupervisedPickerRunner.java:28)
at java.desktop/java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:318)
at java.desktop/java.awt.EventQueue.dispatchEventImpl(EventQueue.java:781)
at java.desktop/java.awt.EventQueue$4.run(EventQueue.java:728)
at java.desktop/java.awt.EventQueue$4.run(EventQueue.java:722)
at java.base/java.security.AccessController.doPrivileged(AccessController.java:400)
at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:87)
at java.desktop/java.awt.EventQueue.dispatchEvent(EventQueue.java:750)
at java.desktop/java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:207)
at java.desktop/java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:128)
at java.desktop/java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:117)
at java.desktop/java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:113)
at java.desktop/java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:105)
at java.desktop/java.awt.EventDispatchThread.run(EventDispatchThread.java:92)Feb 27, 2026 11:30:11 AM xmipp.viewer.particlepicker.training.SupervisedPickerRunner run
SEVERE: No such micrograph exists
java.lang.IllegalArgumentException: No such micrograph exists
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.loadEmptyMicrographsFromMd(SupervisedParticlePicker.java:430)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.loadEmptyMicrographs(SupervisedParticlePicker.java:373)
at xmipp.viewer.particlepicker.ParticlePicker.(ParticlePicker.java:160)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.(SupervisedParticlePicker.java:76)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.(SupervisedParticlePicker.java:69)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.(SupervisedParticlePicker.java:122)
at xmipp.viewer.particlepicker.training.SupervisedPickerRunner.run(SupervisedPickerRunner.java:28)
at java.desktop/java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:318)
at java.desktop/java.awt.EventQueue.dispatchEventImpl(EventQueue.java:781)
at java.desktop/java.awt.EventQueue$4.run(EventQueue.java:728)
at java.desktop/java.awt.EventQueue$4.run(EventQueue.java:722)
at java.base/java.security.AccessController.doPrivileged(AccessController.java:400)
at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:87)
at java.desktop/java.awt.EventQueue.dispatchEvent(EventQueue.java:750)
at java.desktop/java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:207)
at java.desktop/java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:128)
at java.desktop/java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:117)
at java.desktop/java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:113)
at java.desktop/java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:105)
at java.desktop/java.awt.EventDispatchThread.run(EventDispatchThread.java:92)java.lang.IllegalArgumentException: No such micrograph exists
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.loadEmptyMicrographsFromMd(SupervisedParticlePicker.java:430)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.loadEmptyMicrographs(SupervisedParticlePicker.java:373)
at xmipp.viewer.particlepicker.ParticlePicker.(ParticlePicker.java:160)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.(SupervisedParticlePicker.java:76)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.(SupervisedParticlePicker.java:69)
at xmipp.viewer.particlepicker.training.model.SupervisedParticlePicker.(SupervisedParticlePicker.java:122)
at xmipp.viewer.particlepicker.training.SupervisedPickerRunner.run(SupervisedPickerRunner.java:28)
at java.desktop/java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:318)
at java.desktop/java.awt.EventQueue.dispatchEventImpl(EventQueue.java:781)
at java.desktop/java.awt.EventQueue$4.run(EventQueue.java:728)
at java.desktop/java.awt.EventQueue$4.run(EventQueue.java:722)
at java.base/java.security.AccessController.doPrivileged(AccessController.java:400)
at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:87)
at java.desktop/java.awt.EventQueue.dispatchEvent(EventQueue.java:750)
at java.desktop/java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:207)
at java.desktop/java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:128)
at java.desktop/java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:117)
at java.desktop/java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:113)
at java.desktop/java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:105)
at java.desktop/java.awt.EventDispatchThread.run(EventDispatchThread.java:92)