From 85c971b334bb2abd30ed9db01b4f2f282aadc87d Mon Sep 17 00:00:00 2001
From: Quentin Dessain <quentin.dessain@uclouvain.be>
Date: Fri, 8 Sep 2023 17:40:08 -0400
Subject: [PATCH] Fix typo in patient list wrapper
---
elikopy/core.py | 7 ++++---
1 file changed, 4 insertions(+), 3 deletions(-)
diff --git a/elikopy/core.py b/elikopy/core.py
index 7a156ee..924c7ad 100644
--- a/elikopy/core.py
+++ b/elikopy/core.py
@@ -2404,16 +2404,17 @@ def patientlist_wrapper(self, function, func_args, folder_path=None, patient_lis
for p in patient_list:
patient_path = p
if slurm_subpath is None:
- slurm_path = folder_path + '/subjects/' + patient_path + '/' + "slurm-%j"
+ slurm_path = folder_path + '/subjects/' + patient_path + '/'
else:
- slurm_path = folder_path + '/subjects/' + patient_path + '/' + slurm_subpath + "/slurm-%j"
+ slurm_path = folder_path + '/subjects/' + patient_path + '/' + slurm_subpath
if not (os.path.exists(slurm_path)):
try:
os.makedirs(slurm_path)
except OSError:
print("Creation of the directory %s failed" % slurm_path)
-
+ slurm_path = slurm_path + "/slurm-%j"
+
if slurm:
job = {
"wrap": "export OMP_NUM_THREADS=" + str(core_count) + " ; export FSLPARALLEL=" + str(