Test dockerfile (#14)

* Update to SuiteSparse:GraphBLAS 5.0.3.

Also, add sanity check to make sure all GrB and GxB lines are handled.
This would have caught the issue of the new functions not being public in v5.0.2.

* test dockerfile

* test dockerfile

* test dockerfile

* clean up apt, move toward multi stage

* multistage docker file down to 227MB

* add docker build script.

Co-authored-by: Erik Welch <[email protected]>

Author: michelp

.dockerignore

@@ -0,0 +1 @@
+Dockerfile

Dockerfile

@@ -0,0 +1,48 @@
+ARG BASE_CONTAINER=python:3.9-slim-buster
+FROM ${BASE_CONTAINER} as suitesparse
+ENV DEBIAN_FRONTEND=noninteractive
+
+RUN apt-get update && apt-get install -yq build-essential cmake git
+
+ARG SUITESPARSE
+ARG COMPACT
+
+WORKDIR /build
+RUN git clone https://github.com/eliben/pycparser.git --depth 1
+
+WORKDIR /build/GraphBLAS/build
+RUN git clone https://github.com/DrTimothyAldenDavis/GraphBLAS.git --depth 1 --branch v${SUITESPARSE} \
+    && cd GraphBLAS/build \
+    && cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DGBCOMPACT=${COMPACT} \
+    && make -j$(nproc) \
+    && make install
+
+FROM ${BASE_CONTAINER} as psg
+ARG SUITESPARSE
+ARG VERSION
+ENV PYTHONUNBUFFERED 1
+
+COPY --from=suitesparse  /usr/include/GraphBLAS.h /usr/local/include/
+COPY --from=suitesparse /usr/lib/x86_64-linux-gnu/libgraphblas* /usr/lib/x86_64-linux-gnu/
+COPY --from=suitesparse /build/pycparser/utils/fake_libc_include/* /usr/local/lib/python3.9/site-packages/pycparser/utils/fake_libc_include/
+
+RUN apt-get update && apt-get install -yq build-essential git
+RUN pip3 install numpy cffi pytest cython
+    
+RUN mkdir -p /build/python-suitesparse-graphblas
+ADD . /build/python-suitesparse-graphblas
+
+WORKDIR /build/python-suitesparse-graphblas
+RUN git tag ${VERSION} && \
+    python3 suitesparse_graphblas/create_headers.py && \
+    python3 setup.py install && \
+    ldconfig
+
+WORKDIR /
+RUN pytest --pyargs suitesparse_graphblas.tests
+RUN apt-get -y --purge remove git python3-pip && apt-get clean
+
+FROM ${BASE_CONTAINER}
+COPY --from=suitesparse /usr/lib/x86_64-linux-gnu/libgraphblas* /usr/lib/x86_64-linux-gnu/
+COPY --from=suitesparse /usr/lib/x86_64-linux-gnu/libgomp* /usr/lib/x86_64-linux-gnu/
+COPY --from=psg /usr/local/lib/python3.9/site-packages /usr/local/lib/python3.9/site-packages

docker_build.sh

@@ -0,0 +1,49 @@
+if [ $# -eq 0 ]
+    then
+        echo "Usage: ./docker_build.sh SUITESPARSE VERSION BRANCH [LOCATION PUSH]
+
+Example: ./docker_build.sh 5.0.6 5.0.6.0 main clone push
+
+If location is clone then a fresh git clone will be used.  
+If push is provided then the script will attempt to push to dockerhub."
+        exit 1
+fi
+
+IMAGE=graphblas/python-suitesparse-graphblas
+SUITESPARSE=$1
+VERSION=$2
+BRANCH=$3
+LOCATION=$4
+PUSH=$5
+
+COMPACT=${COMPACT:-0}
+
+if [ "$LOCATION" = "clone" ]
+then
+    TMPDIR=$(mktemp -d)
+    if [ ! -e $TMPDIR ]; then
+        >&2 echo "Failed to create temp directory"
+        exit 1
+    fi
+    trap "exit 1"           HUP INT PIPE QUIT TERM
+    trap 'rm -rf "$TMPDIR"' EXIT
+    
+    cd $TMPDIR
+    git clone --branch $BRANCH https://github.com/GraphBLAS/python-suitesparse-graphblas.git
+    cd python-suitesparse-graphblas
+fi
+
+docker build \
+       --build-arg SUITESPARSE=${SUITESPARSE} \
+       --build-arg VERSION=${VERSION} \
+       --build-arg COMPACT=${COMPACT} \
+       -t $IMAGE:$VERSION \
+       .
+
+docker tag $IMAGE:$VERSION $IMAGE:latest
+
+if [ "$PUSH" = "push" ]
+then
+    docker push $IMAGE:$VERSION
+    docker push $IMAGE:latest
+fi