Merge branch 'main' into add_write_oasis_mesh_files #367
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| # original version by @suvarchal | |
| name: pyfesom2 short test | |
| # Controls when the action will run. Triggers the workflow on push or pull request. | |
| on: [push] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| setup: | |
| name: ${{matrix.os}}-py-${{matrix.python-version}} | |
| runs-on: ${{ matrix.os }} #, macos-latest, windows-latest] | |
| strategy: | |
| #max-parallel: 1 | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest"] | |
| python-version: ["3.9"] | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| path: main | |
| - name: Checkout pyfesom2 | |
| uses: actions/checkout@v3 | |
| with: | |
| repository: FESOM/pyfesom2 | |
| path: pyfesom2 | |
| fetch-depth: 0 | |
| - name: Update SSL on MacOS | |
| if: contains(matrix.os, 'macos') | |
| run: | | |
| brew update | |
| brew reinstall openssl | |
| sudo mkdir -p /usr/local/lib | |
| sudo ln -sv /opt/homebrew/opt/openssl/lib/libcrypto.3.dylib /usr/local/lib/ | |
| - name: install conda environment | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-file: main/ci/requirements-py37.yml | |
| environment-name: pyfesom2 | |
| cache-environment-key: "${{runner.os}}-${{runner.arch}}-py${{env.PYTHON_VERSION}}-${{env.TODAY}}-${{hashFiles(env.CONDA_ENV_FILE)}}" | |
| init-shell: >- | |
| bash | |
| zsh | |
| # - name: Checkout git commit log | |
| # working-directory: pyfesom2 | |
| # run: | | |
| # git checkout suvi_test_branch_workflow | |
| # git log | |
| - name: Checkout xarray version | |
| run: | | |
| python -c "import xarray; print('xarray version:', xarray.__version__)" | |
| python -c "import netCDF4; print('netcdf4 (py,c) versions:', netCDF4.__version__, netCDF4._netCDF4.__netcdf4libversion__)" | |
| - name: Install pyfesom2 | |
| working-directory: pyfesom2 | |
| run: | | |
| python -m pip install -e . | |
| - name: Test pyfesom2 import | |
| working-directory: pyfesom2 | |
| run: | | |
| python -c "import pyfesom2" | |
| - name: Test pyfesom2 | |
| working-directory: pyfesom2 | |
| run: | | |
| pytest |