Version 2 beta release 7

This release includes

Bug fixes

• Do not try to guess or warn about missing bounds when there shouldn't be any (#503) Bouwe Andela
• Fix bug with matplotlib backend environmental variable (#550) Bouwe Andela

Fixes for datasets

• Fix CMIP5 FGOALS-g2 and NorESM1-ME coordinates (#477) Evert Rol
• Add option to round only specified coordinates in fixes (#476) Evert Rol
• Fix for bad time bounds in CMIP5 GFDL-CM2p1 sit (#462) Javier Vegas-Regidor

Improvements

• Add warning and automatic fix for no bounds (#166) Javier Vegas-Regidor
• Fix test failing on stricter cmor check (#501) Bouwe Andela
• Add time filter preprocessor (#335) Valeriu Predoi
• Better error message when cube does not contain requested time (#502) Bouwe Andela
• Include alias in MultiModel attributes (#499) Benjamin Müller
• Add test for simple mask combination for a small threshold for mask_fillvalues (#492) Valeriu Predoi
• Add option to standardize to anomalies preprocessor function (#300) bascrezee
• Moved and completed time preprocessors list (#508) Valeriu Predoi
• Add preprocessor extract_point function (#478) Evert Rol
• Correct some typos (#520) Bouwe Andela
• Minor improvements to installation (#523) Bouwe Andela
• Improve text of extract_transect preprocessor function exceptions (#526) Valeriu Predoi
• Add documentation to avoid using leading 0s to specify years in recipe (#506) Manuel Schlund
• Run more relevant tests on CircleCI (#525) Bouwe Andela
• Refactor preprocessor settings related to fx files (#522) Klaus Zimmermann
• Unpin Python<3.8 for conda package (#530) Valeriu Predoi
• Use Julia environment for running Julia diagnostics (#528) Bouwe Andela
• Allow anomalies to be computed using the climatology from a subset of the selected period (#441) Javier Vegas-Regidor
• Immediately stop all tasks on error (#534) Bouwe Andela
• Increase version to v2.0.0b7 (#533) Bouwe Andela
• Test get start end year replace with tmp_dir/test.nc so no fluke dates can be found in temporary file name (#532) Valeriu Predoi

Version 2 beta release 6

This release includes

Bug fixes

• Fix mistake in error message for diagnostic scripts that are not executable (#437) Bouwe Andela
• Fix unit tests to check for numpy array mask equality as well (#396) Valeriu Predoi
• Clean up unit tests and fix warnings (#452) Bouwe Andela
• Correct typo in documentation on how to implement a fix (#458) Bouwe Andela
• Fix extract month (#482) bascrezee

Fixes for datasets

• Fix areacello in CMIP5 EC-Earth (#457) Javier Vegas-Regidor
• Support for ERA5 data in native format (#358) Peter9192

New features

• Add the CORDEX project to ESMValTool (#183) None
• Enhance error when input files are not found (#98) Manuel Schlund
• Added custom CMOR table for hurStderr (#460) Manuel Schlund
• Update alias to include also activity if necessary (#467) Javier Vegas-Regidor
• Better default configuration (#465) Bouwe Andela
• Try to add is-enes3 community and is-enes3 grant to zenodo and update authors (#468) Bouwe Andela
• Attempt concatenation when cubes have overlapping data (#280) Valeriu Predoi
• Added test for check of data availability and fixed some checks for _recipe.py (#455) Manuel Schlund
• Increase version to v2.0.0b6 (#483) Bouwe Andela

Version 2 beta release 5

This release includes

Bug fixes

• A correct version number (#438) Bouwe Andela

Version 2 beta release 4

This release includes

Bug fixes

• Fix regrid preprocessor (#216) Javier Vegas-Regidor
• Fix regrid time function to add year yr frequency and remove resetting calendars (#351) Valeriu Predoi
• Mask_landsea file finding not done using the first member of file name only (#363) Valeriu Predoi
• Use abspath as default for cmor table location (#382) Javier Vegas-Regidor
• rlnstcs derived variable fix (#395) Katja Weigel
• Run extract_time only on non fx variables (#397) Valeriu Predoi
• Fix typo in MIROC-ESM fix (#411) Bouwe Andela
• Consistently use dimension/coordinate names in VariableInfo.coordinates (#413) Bouwe Andela
• Remove duplicate line in check.py (#419) Mattia Righi
• Allowed arbitrary CMIP6 fx variables in special preprocessors and error message on invalid project (#432) Manuel Schlund
• Remove log message about reference file (#435) Mattia Righi

Fixes for datasets

• Fixes for MPI-ESM1-2-HR and MPI-ESM1-2-XR (#356) sloosvel
• Template for GitHub issue for dataset problems (#361) Valeriu Predoi
• Fix fix for tas of GFDL-CM4 (#372) Manuel Schlund
• Fixes for CMIP6 MCM-UA-1-0 (#426) Manuel Schlund

New features

• Expand home directory in diagnostic script paths (#255) Javier Vegas-Regidor
• Support CMIP3 (#269) Javier Vegas-Regidor
• extract_shape: support for subregions in shapefiles preprocessor (#272) Inti Pelupessy
• Added land/sea fraction weighting preprocessor (#331) Manuel Schlund
• Changed surface albedo calculation from all-sky to clear-sky (#362) Axel Lauer
• Update CMIP6 CMOR tables to version 01.00.31 (6.8.31) (#363) Bouwe Andela
• Support downloading fx files using synda (#366) Bouwe Andela
• Remove start_year-end_year from the output filename of fx files (#369) Bouwe Andela
• Generalized land/sea/ice Natural Earth mask to account for possible multiple regions (#389) Valeriu Predoi
• Add mask glaciated (#392) bascrezee
• Update deprecated getargspec in check_preprocessor_settings.py (#401) Peter9192
• Add institute mapping for CSIRO datasets (#410) Jaro Camphuijsen
• Use the master branch as default (#415, #417) Bouwe Andela
• Remove derived variable gtfgco2 (#418) Bouwe Andela
• Use alias instead of dataset in max datasets log (#421) Javier Vegas-Regidor
• Remove automatic addition of time auxiliary coordinates (#426) Javier Vegas-Regidor
• Log max memory used by the recipe in the main log (#427) Javier Vegas-Regidor
• Rename zonal_means to zonal_statistics (#433) Mattia Righi

Version 2 beta release 3

This release includes

Bug fixes

• Fix wrong name of cmor_path that prevented obs4mips cmor tables from being used (#236)
• Fix bug in extract_region for irregular grids (#243)
• Bug fix in multi model statistics preprocessor function (#267)
• Bug fix for extract_time preprocessor function failing to get 0:00 hours of first day (#259)
• Correctly retrieve the activity for experiments linked to multiple ids (#257)
• Support pt frequencies (#240)

Fixes for datasets

• Added fix for wrong parent_time_units attribute for UKESM1-0-LL (#194)
• Fix missing height in EC-Earth (#256)
• Fix XCO2 units (custom table) (#291)
• Fix Fgoals fix (#306)
• GFDL fixes for areacello (#308)
• Add fixes to GFDL-CM4 near-surface uas, vas and tas (#330)
• Added fix for GPP of CESM1-BGC (#353)

New/updated derived variables

• CMIP6 updates for variable derivation (lwp) (#271)
• Add ocean heat content (ohc) derived variable (#192)
• Added vegfrac as a derived variable (#288)
• Add derivation of total ecosystem carbon mass content (#322)

New features

• Improved fx file handling (#170, #297, #230, #348)
• Add extract_shape preprocessor function (#220)
• Added sum operator to statistics preprocessors (#290)
• Add option to expand ensembles (#206)
• Make 2d and 1d region extraction consistent (#204)
• Better concatenation error message (#224)
• Make fixes case insensitive (#254)
• Support Windows Subsystem for Linux (#276)
• Check parent_time_unit format (#231)
• Use glob in datafinder (#210)
• Add precipitation type custom table entry (#263)

Performance improvements

• Prioritize task execution by recipe order (#4)
• Convert fix_files to fix_metadata (#225)

Workarounds

• Make obs4mips not cmor strict (#305)

Version 2 beta release 2

This release includes

• Updates to temporal preprocessors
• Detrend preprocessor
• New OBS6 project for observational datasets (CMIP6 CMOR table with custom extensions)

Version 2 beta release 1

This release includes

• Improved documentation
• Additional derived variables
• Additional fixes for datasets
• Automatic fix of wrong standard and long name
• Automatic renaming of latitude and longitude coordinates to lat and lon for multidimensional grids
• Improved handling of branch time attributes
• Better support for using variables with a custom frequency
• Pre-defined names (aliases) for datasets that can be used by the diagnostic script
• Check that time coordinate is monotonic
• Reduced number of iris warnings
• Natural Earth land/sea masks can now be applied to 2D data
• Data from experiments with differing ensemble names can now be concatenated
• Added citation information

Version 2 beta release 0

This release includes

• New preprocessor function convert_units
• Lower memory use for certain variables and models
• Faster provenance recording for large provenance trees
• More unit tests

Version 2 alpha release 1

This release includes

• Improvements to documentation
• Renamed preprocessor functions: average_region to area_statistics and average_volume to volume_statistics

Version 2 alpha release 0

Preview of the upcoming version 2 release.