diff --git a/.github/workflows/ingestion-ci.yml b/.github/workflows/ingestion-ci.yml index aae7c165..bc74adea 100644 --- a/.github/workflows/ingestion-ci.yml +++ b/.github/workflows/ingestion-ci.yml @@ -31,9 +31,8 @@ jobs: python-version: ${{ matrix.python-version }} channels: conda-forge channel-priority: strict - - - run: | - mamba install -n pipeline_env r-base=4.3.0 + activate-environment: pipeline_env + environment-file: pipeline_env.yaml - name: Conda info if: env.debug == 'true' @@ -45,10 +44,6 @@ jobs: shell: pwsh run: conda list - - name: Install dependencies - run: | - mamba env create -f requirements.txt - - name: Run tests run: | python -m pytest tests/