diff --git a/panpipes/python_scripts/run_preprocess_prot.py b/panpipes/python_scripts/run_preprocess_prot.py index 19b5e7f1..793bac7b 100644 --- a/panpipes/python_scripts/run_preprocess_prot.py +++ b/panpipes/python_scripts/run_preprocess_prot.py @@ -110,7 +110,7 @@ sys.exit("The MuData you specified does not contain rna modality. Cannot run dsb") # the RNA and PROT must intersect - they won't if experimental design included some cells without PROT data - L.info("Checking that only cells with PROT signal present are in the bacground object") + L.info("Checking that only cells with PROT signal present are in the background object") if all_mdata_bg['rna'].shape[0] != all_mdata_bg['prot'].shape[0]: mu.pp.intersect_obs(mdata_bg) all_mdata_bg.update()